Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C15
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1201 - 11419851-11419913,11420090-11420311                       32   0.73 
04_03_0380 - 15150814-15152304                                         29   5.1  
04_03_0348 + 14735581-14737071                                         29   5.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  

>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
 Frame = +2

Query: 545 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCSDPAAYPD---TCPPFSL 709
           L PP          Q+WR+  PTG   + +FP G LP A     PA  PD     P F  
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPA--PDRQPATPLFPS 70

Query: 710 REAWRFLIXHAVXISVRCXSFAP 778
           R A      + + + +   +F P
Sbjct: 71  RVAEGLFGLNGIEVGIEGDNFTP 93


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 723 RHASRREKGGQVSG*AAGSEQESARGSXPGGNA 625
           R A   EKG ++   AAG ++ +AR + PGG A
Sbjct: 440 REAMEGEKGAEMRRRAAGWKEAAARAARPGGPA 472


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 723 RHASRREKGGQVSG*AAGSEQESARGSXPGGNA 625
           R A   EKG ++   AAG ++ +AR + PGG A
Sbjct: 440 REAMEGEKGAEMRRRAAGWKEAAARAARPGGPA 472


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 357 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 512
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 306 NESAN---ARGEAVCVLGALPLPRSLTRCAR 389
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,601,443
Number of Sequences: 37544
Number of extensions: 466101
Number of successful extensions: 1239
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)