Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C13
(907 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 67 7e-11
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 67 7e-11
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 67 7e-11
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 67 7e-11
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 67 7e-11
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 67 7e-11
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 67 7e-11
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 50 9e-06
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 45 3e-04
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 67.3 bits (157), Expect = 7e-11
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQXXXVNLRNHXKNKXYKPLEFKXPRXPV 355
LRVAKV GG ASKLSK+RVV K+ ARV V +Q NLR K K YKPL+ + +
Sbjct: 31 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90
Query: 356 LCARLLLNTKQRSXRGKRSER 418
+ R LN + + + K+ +R
Sbjct: 91 M--RRRLNKHEENLKTKKQQR 109
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 67.3 bits (157), Expect = 7e-11
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQXXXVNLRNHXKNKXYKPLEFKXPRXPV 355
LRVAKV GG ASKLSK+RVV K+ ARV V +Q NLR K K YKPL+ + +
Sbjct: 31 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90
Query: 356 LCARLLLNTKQRSXRGKRSER 418
+ R LN + + + K+ +R
Sbjct: 91 M--RRRLNKHEENLKTKKQQR 109
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 67.3 bits (157), Expect = 7e-11
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQXXXVNLRNHXKNKXYKPLEFKXPRXPV 355
LRVAKV GG ASKLSK+RVV K+ ARV V +Q NLR K K YKPL+ + +
Sbjct: 31 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90
Query: 356 LCARLLLNTKQRSXRGKRSER 418
+ R LN + + + K+ +R
Sbjct: 91 M--RRRLNKHEENLKTKKQQR 109
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 67.3 bits (157), Expect = 7e-11
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQXXXVNLRNHXKNKXYKPLEFKXPRXPV 355
LRVAKV GG ASKLSK+RVV K+ ARV V +Q NLR K K YKPL+ + +
Sbjct: 31 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90
Query: 356 LCARLLLNTKQRSXRGKRSER 418
+ R LN + + + K+ +R
Sbjct: 91 M--RRRLNKHEENLKTKKQQR 109
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 67.3 bits (157), Expect = 7e-11
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQXXXVNLRNHXKNKXYKPLEFKXPRXPV 355
LRVAKV GG ASKLSK+RVV K+ ARV V +Q NLR K K YKPL+ + +
Sbjct: 31 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90
Query: 356 LCARLLLNTKQRSXRGKRSER 418
+ R LN + + + K+ +R
Sbjct: 91 M--RRRLNKHEENLKTKKQQR 109
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 67.3 bits (157), Expect = 7e-11
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQXXXVNLRNHXKNKXYKPLEFKXPRXPV 355
LRVAKV GG ASKLSK+RVV K+ ARV V +Q NLR K K YKPL+ + +
Sbjct: 31 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90
Query: 356 LCARLLLNTKQRSXRGKRSER 418
+ R LN + + + K+ +R
Sbjct: 91 M--RRRLNKHEENLKTKKQQR 109
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 67.3 bits (157), Expect = 7e-11
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQXXXVNLRNHXKNKXYKPLEFKXPRXPV 355
LRVAKV GG ASKLSK+RVV K+ ARV V +Q NLR K K YKPL+ + +
Sbjct: 31 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90
Query: 356 LCARLLLNTKQRSXRGKRSER 418
+ R LN + + + K+ +R
Sbjct: 91 M--RRRLNKHEENLKTKKQQR 109
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 50.4 bits (115), Expect = 9e-06
Identities = 27/44 (61%), Positives = 30/44 (68%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQXXXVNLRNHXK 307
LRVAKV GG ASKLSK+RVV K+ ARV V +Q NLR K
Sbjct: 30 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYK 73
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 45.2 bits (102), Expect = 3e-04
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 176 LRVAKVXGGVASKLSKLRVVSKAXARVYIVYHQ 274
LRVAKV GG ASKLSK+RVV K+ ARV V +Q
Sbjct: 1 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,492,193
Number of Sequences: 237096
Number of extensions: 623099
Number of successful extensions: 654
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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