Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C12
(906 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g29080.1 68416.m03641 hypothetical protein 34 0.11
At1g62250.2 68414.m07023 expressed protein 30 1.8
At1g62250.1 68414.m07022 expressed protein 30 1.8
At5g09400.1 68418.m01089 potassium transporter family protein si... 29 4.2
At1g77240.1 68414.m08996 AMP-binding protein, putative strong si... 29 4.2
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A... 29 5.6
At2g23190.1 68415.m02770 cytochrome P450, putative Similar to C... 29 5.6
At1g64150.1 68414.m07267 expressed protein contains Pfam profile... 29 5.6
At5g57655.2 68418.m07204 xylose isomerase family protein contain... 28 7.4
At5g57655.1 68418.m07203 xylose isomerase family protein contain... 28 7.4
At1g47310.1 68414.m05238 expressed protein 28 7.4
At3g12775.1 68416.m01595 ubiquitin-conjugating enzyme family pro... 28 9.8
>At3g29080.1 68416.m03641 hypothetical protein
Length = 445
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 254 EGKEGRGYQGSREASDRKRQEEHHGTSPTSYGQRMERK 367
E +EG GY EA D +R+ +H TS ++ G ERK
Sbjct: 395 EAEEGSGYHQRWEALDSRRKHDHSRTSGSALGTGTERK 432
>At1g62250.2 68414.m07023 expressed protein
Length = 223
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 106 LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 234
LC P + +RW TP + E+++ WR C +++ R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222
>At1g62250.1 68414.m07022 expressed protein
Length = 267
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 106 LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 234
LC P + +RW TP + E+++ WR C +++ R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222
>At5g09400.1 68418.m01089 potassium transporter family protein
similar to K+ transporter HAK5 [Arabidopsis thaliana]
GI:7108597; contains Pfam profile PF02705: K+ potassium
transporter; KUP/HAK/KT Transporter family member,
PMID:11500563; Note: possible sequencing error causes a
frameshift in the 4th exon|15810448|gb|AY056263
Length = 858
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = -3
Query: 292 FTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKA 113
F +S+ S F+ + ++A ++ MTT +SC S+ LG L+ HT+R
Sbjct: 411 FFSSVPGSAFWPVLFIANIAALIASRTMTTATFSC-IKQSTALGCFPRLKI-IHTSRKFM 468
Query: 112 NKVSLILAQWLSL 74
++ + + W L
Sbjct: 469 GQIYIPVLNWFLL 481
>At1g77240.1 68414.m08996 AMP-binding protein, putative strong
similarity to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 545
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 370 VKSYFPIQFRVIFTEQTVKLINKR-DHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTP 546
V S + +QF V + + IN R D HAL ++ + + +K+ F D + + F P
Sbjct: 76 VPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLVFVDHHSSSLVLEAVSFLP 135
Query: 547 VLENNRV 567
E R+
Sbjct: 136 KDERPRL 142
>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
thaliana]; similar to cytochrome P450LXXIA1, Persea
americana, M32885
Length = 490
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 453 GVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 361
G +P + +D + G+DH + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251
>At2g23190.1 68415.m02770 cytochrome P450, putative Similar to
Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
Length = 543
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 364 PFHPLSITGRRSXMVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVS 221
P PL G + L + F+ SL +P FS R HL + VS
Sbjct: 79 PARPLPFIGHLHLLKQPLHRTFLSFSQSLGDAPIFSLRLGNHLTVVVS 126
>At1g64150.1 68414.m07267 expressed protein contains Pfam profile
PF01169: Uncharacterized protein family UPF0016
Length = 370
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 672 GVSGAITVDDTVITRTFRVIELQVLFVLGGHDLEVNSV 559
G G +T+ V+ RTF ++ + F GG DL ++ +
Sbjct: 197 GALGIMTIISVVLGRTFHYVDEVLPFRFGGTDLPIDDI 234
>At5g57655.2 68418.m07204 xylose isomerase family protein contains
similarity to Xylose isomerase (EC 5.3.1.5)
(Swiss-Prot:P22842) [Thermoanaerobacter ethanolicus]
Length = 477
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 736 NREYNSVMTLDEDMAANEDVKP-WGTAEKXPVIPNFLHG--TSSLLSV 870
N+ + V+ L +++ +KP WGTA+ + P ++HG TSS + V
Sbjct: 157 NKNLDEVIELAKELQKGSKIKPLWGTAQLF-LHPRYMHGGATSSEVGV 203
>At5g57655.1 68418.m07203 xylose isomerase family protein contains
similarity to Xylose isomerase (EC 5.3.1.5)
(Swiss-Prot:P22842) [Thermoanaerobacter ethanolicus]
Length = 287
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 736 NREYNSVMTLDEDMAANEDVKP-WGTAEKXPVIPNFLHG--TSSLLSV 870
N+ + V+ L +++ +KP WGTA+ + P ++HG TSS + V
Sbjct: 157 NKNLDEVIELAKELQKGSKIKPLWGTAQLF-LHPRYMHGGATSSEVGV 203
>At1g47310.1 68414.m05238 expressed protein
Length = 395
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +1
Query: 409 TEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMST 588
T QTV + + A ++ Q + + G ++ SKKV+W+ P +E RV+F++ +
Sbjct: 286 TRQTVSSVTAK-LKASGMVRFQLEIERSIGKNESVISKKVAWRTKPKIE--RVWFEVTAK 342
Query: 589 EDKQYLK 609
+ LK
Sbjct: 343 IEGDKLK 349
>At3g12775.1 68416.m01595 ubiquitin-conjugating enzyme family
protein contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 362
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 499 DSKDKTSKKVSWKFTPVLENNRVYF-KIMSTEDKQYLKLDNTKGSSDDRIIYGDSTAD 669
D +++ KK+ WK E N+VY +I++++ K L+ K + YG S+++
Sbjct: 277 DMEEERDKKMFWKMYFAFEGNKVYCEQILNSDLKAELEKLKEKEYTLSDYYYGSSSSN 334
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,481,056
Number of Sequences: 28952
Number of extensions: 416599
Number of successful extensions: 1460
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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