Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C11
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X80763-1|CAB59978.1|  458|Homo sapiens 5-hydroxytrptamine 2C rec...    32   2.4  
U49516-1|AAB40898.1|  458|Homo sapiens serotonin 5-HT2c receptor...    32   2.4  
M81778-1|AAA60317.1|  458|Homo sapiens serotonin receptor protein.     32   2.4  
BC095543-1|AAH95543.1|  458|Homo sapiens 5-hydroxytryptamine (se...    32   2.4  
AL590097-2|CAH70193.1|  458|Homo sapiens 5-hydroxytryptamine (se...    32   2.4  
AL355812-2|CAI41335.1|  458|Homo sapiens 5-hydroxytryptamine (se...    32   2.4  
AF498983-1|AAM21130.1|  458|Homo sapiens 5-hydroxytryptamine rec...    32   2.4  
AF208053-1|AAF35842.1|  458|Homo sapiens edited 5-hydroxytryptam...    32   2.4  

>X80763-1|CAB59978.1|  458|Homo sapiens 5-hydroxytrptamine 2C
           receptor protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 485 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGH 649
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L +  GH
Sbjct: 200 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGH 252


>U49516-1|AAB40898.1|  458|Homo sapiens serotonin 5-HT2c receptor
           protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 485 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGH 649
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L +  GH
Sbjct: 200 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGH 252


>M81778-1|AAA60317.1|  458|Homo sapiens serotonin receptor protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 485 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGH 649
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L +  GH
Sbjct: 200 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGH 252


>BC095543-1|AAH95543.1|  458|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 2C protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 485 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGH 649
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L +  GH
Sbjct: 200 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGH 252


>AL590097-2|CAH70193.1|  458|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 2C protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 485 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGH 649
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L +  GH
Sbjct: 200 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGH 252


>AL355812-2|CAI41335.1|  458|Homo sapiens 5-hydroxytryptamine
           (serotonin) receptor 2C protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 485 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGH 649
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L +  GH
Sbjct: 200 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGH 252


>AF498983-1|AAM21130.1|  458|Homo sapiens 5-hydroxytryptamine
           receptor 2C protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 485 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGH 649
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L +  GH
Sbjct: 200 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGH 252


>AF208053-1|AAF35842.1|  458|Homo sapiens edited 5-hydroxytryptamine
           receptor 2C protein.
          Length = 458

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 485 VLLGDNVVIANDPIECIVYLGSFIAFHVAVKVLLSKYVIRLYQDGDDYLAVFRGH 649
           V + +   + NDP    V +GSF+AF + + +++  Y + +Y      L +  GH
Sbjct: 200 VFVNNTTCVLNDPN--FVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGH 252


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,883,853
Number of Sequences: 237096
Number of extensions: 2498590
Number of successful extensions: 7783
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7783
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)