Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C10
(914 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 7e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.011
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 35 0.014
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.019
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.23
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.23
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.45
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.70
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.70
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.92
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 2.1
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 4.9
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.5 bits (88), Expect = 7e-04
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = +2
Query: 326 GGGPXGXGGGXGXTXGGXXGXXGGGGXXGXP 418
GGGP G GGG G GG G GG G G P
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/31 (54%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 329 GGPXGXGGGXGXTXGGXXGXXGG-GGXXGXP 418
GGP G GGG G GG G GG GG G P
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 326 GGGPXGXGGGXGXTXGGXXGXXGG-GGXXGXP 418
GGGP G GG G GG G GG GG G P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Score = 32.7 bits (71), Expect = 0.075
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = -1
Query: 833 GGXXGAXGGGXXGGXGXRGGGGXXGGGXPGXXPXGXGRWPXXGPXLXPGVAXGXGG 666
G G GG G G GG G GGG PG G G + GP G G GG
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGG-PGGFGGGLGGF-GGGPGGFGGGPGGHGG 270
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 830 GXXGAXGGGXXGGXGXRGGG-GXXGGGXPGXXPXGXGRWPXXGPXLXPGVAXGXGG 666
G G G G GG G GG G GGG PG G G + GP G G GG
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGG-PGGFEGGPGGF-GGGPGGFGGGLGGFGG 256
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 266 GPPXPPPPPXXX*NXAGXEXGGGPXGXGGGXGXTXGGXXGXXGG-GGXXG 412
G PPP P G G G GG G GG G GG GG G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 833 GGXXGAXGGGXXGGXGXRGG--GGXXGGGXPG 744
GG G GGG G G GG GG G G PG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 326 GGGPXGXGGGXGXTXGGXXGXXGGGGXXG 412
GGG G GGG G G G G GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGG 215
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 326 GGGPXGXGGGXGXTXGGXXGXXGGG 400
GGG G GGG G GG G G G
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.2 bits (55), Expect = 6.5
Identities = 28/78 (35%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Frame = +1
Query: 319 GXGGGPPXXRGG-XGXDPXGXXG--XXGGGGAXGXPK--RXPPEXRXAPPXPFTPRLRSR 483
G GGPP GG G G G G GG G P P P F L
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL--- 251
Query: 484 XXXXGGGXGXGXGXGXGG 537
GGG G G G G GG
Sbjct: 252 -GGFGGGPG-GFGGGPGG 267
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/60 (33%), Positives = 21/60 (35%)
Frame = +1
Query: 655 GXXXPPXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAPXXPP 834
G P P +TP P P P PP PPPP P P PP P P
Sbjct: 1679 GGMAPAHPVSTPPVR--PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 667 PPXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPP 813
PP P A P P P G PPP PP PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +1
Query: 724 PXPXGXXPGXPPPXXPPPPRXPXPPXXP---PPXAPXXPP 834
P P P P PPPP P PP PP P PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPP--PPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 724 PXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAP 822
P P P P P PP P PPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 25.8 bits (54), Expect = 8.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 266 GPPXPPPPP 292
GPP PPPPP
Sbjct: 760 GPPPPPPPP 768
Score = 25.8 bits (54), Expect = 8.6
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 266 GPPXPPPPP 292
GPP PPPPP
Sbjct: 774 GPPPPPPPP 782
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.5 bits (78), Expect = 0.011
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +1
Query: 745 PGXPPPXXPPPPRXPXPPXXPPPXAP 822
PG PPP PPPP PP PPP P
Sbjct: 6 PGNPPP--PPPPPGFEPPSQPPPPPP 29
Score = 34.3 bits (75), Expect = 0.024
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 757 PPXXPPPPRXPXPPXXPPPXAPXXPP 834
PP PPPP P PP PP P PP
Sbjct: 5 PPGNPPPP--PPPPGFEPPSQPPPPP 28
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 724 PXPXGXXPGXPPPXXPPPPRXP 789
P P PG PP PPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 730 PXGXXPGXPPPXXPPPPRXPXPPXXPP 810
P P PPP PP + P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP--PP 30
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.1 bits (77), Expect = 0.014
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = -1
Query: 833 GGXXGAXGGGXXGGXGXRGGGGXXGGGXPG 744
GG GA GGG G G RGG G GG G
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -1
Query: 830 GXXGAXGGGXXGGXGXRGGGGXXGGGXPGXXPXGXGRWPXXGPXLXPGVAXGXGG 666
G G GG G G GG G GGG G G G G G G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRG-GARGGRGGRGGARGGRGG 59
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 833 GGXXGAXGGGXXGGXGX-RGGGGXXGGGXPGXXPXGXGR 720
GG G GG GG G RGG G GG G GR
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -1
Query: 833 GGXXGAXGGGXXGGXGXRGGG-GXXGGGXPGXXPXGXGRWPXXGPXLXPGVAXGXG 669
GG G GG GG G RGG G GG G G P GV G
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIEPHRHAGVFIARG 88
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 329 GGPXGXGGGXGXTXGGXXGXXGGG 400
GG G GG G GG G GGG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGG 39
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 329 GGPXGXGGGXGXTXGGXXGXXGGG 400
GG G GGG G GG G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGG 46
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 313 GXGXGGGPPXXRGGXGXDPXGXXGXXGGGGAXGXPK 420
G GGG RGG G G G G G K
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.019
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 5/73 (6%)
Frame = +1
Query: 628 AXXAPXGGGGXXXPPXPXATPGXXXGPXXG--QRPXPXGXXPGXPPPXXPPP---PRXPX 792
A P G P A P P G P P P PPP PP P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAP-PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 793 PPXXPPPXAPXXP 831
PP PP AP P
Sbjct: 1208 PPVPPPSTAPPVP 1220
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 667 PPXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAP 822
PP P ++ G P P P P P P PP P P PP P
Sbjct: 1050 PPVPKSSSGAPSAPP--PVPAPSSEIPSIPAPSGAPP--VPAPSGIPPVPKP 1097
Score = 29.1 bits (62), Expect = 0.92
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Frame = +1
Query: 667 PPXPXATPGXXXGPXXGQRPX---PXGXXPGXPPPXXPPPPRXPXP--PXXPPPXAPXXP 831
PP P G P + P P P PPP PP P P P P A P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 667 PPXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAPXXP 831
PP P A G P P G PP P P PP P AP P
Sbjct: 1112 PPVP-APSGAPPVPKPSVAAPPVPVPSGAPP---VPKPSVAAPPVPAPSGAPPVP 1162
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Frame = +1
Query: 724 PXPXGXXPGXPPPXXPPP---PRXPXPPXXPPPXAPXXP 831
P P P P P PP P PP P AP P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 706 PXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAP 822
P P P PG PP P P P P P P P
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
Score = 29.1 bits (62), Expect = 0.92
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 706 PXXGQRPXPXGXXPGXPPPXXPPPPRXPXP 795
P G+ P P P P P PP P P P
Sbjct: 118 PLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 706 PXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAPXXP 831
P + P P P P P PP P P P P P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPV-PEEPLPGEPPLP 142
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 676 PXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAPXXP 831
P + P P P P P PPP P P PP AP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = +1
Query: 667 PPXPXATPGXXXG-PXXGQRPXPXGXXPGXP--PPXXPP-PPRXPXPPXXPPPXA 819
PP P P P Q P P P P PP PP+ P PP P A
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVA 212
Score = 29.1 bits (62), Expect = 0.92
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 667 PPXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXP--PPPRXPXPPXXPPPXAPXXPP 834
PP P + P P + P P P P PP P P PP P PP
Sbjct: 151 PPSPASAP-----PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 730 PXGXXPGXPPPXXPPPPRXPXPPXXPPPXAPXXPP 834
P P P PP P P PPP PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = +1
Query: 667 PPXPXA--TPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRX--PXPPXXPPPXAPXXP 831
PP A TP P P P P P PP P P P PPP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPS--IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Frame = +1
Query: 754 PPPXXPPPPRXPXP-PXXPPPXAPXXPP 834
PP PP P P P P PP PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPP 166
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 753 PPPXXPPPPPXPXPP 797
P P PPPPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 25.0 bits (52), Expect(2) = 0.45
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 757 PPXXPPPPRXPXPPXXPPPXAPXXPP 834
PP P P P PPP P PP
Sbjct: 224 PPTYTPKQADPLPA-PPPPPPPTLPP 248
Score = 23.4 bits (48), Expect(2) = 0.45
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 670 PXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPP 780
P +P P P PPP PPPP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +1
Query: 670 PXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXP-PPXAPXXP 831
P P A P P QRP P P P P P P PP P P
Sbjct: 635 PQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVP 689
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +1
Query: 670 PXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXP-PPXAPXXP 831
P A P P QRP P P P P P P PP AP P
Sbjct: 545 PQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVP 599
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.70
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +1
Query: 724 PXPXGXXPGXPPPXXPP-PPRXPX--PPXXP-PPXAPXXPP 834
P P P PP P PP P P P PP AP PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Frame = +1
Query: 676 PXATPGXXXG-PXXGQRPXPXGXXPGXPP--PXXPP-PPRXPXPPXXPPPXAPXXP 831
P A P G P P P P P PP PP P PP P P AP P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP-APAAP 487
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Frame = +1
Query: 667 PPXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPP---XXPPPXAPXXPP 834
PP P + P G P PPP P PP PPP P P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 403 PPPPXXPXXXPXGPAXXPPSXXGAPP 326
PPPP P G PP APP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPP 362
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 667 PPXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAPXXPP 834
P P A PG P P P PP P P PP P P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = +1
Query: 667 PPXPXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPP--PXAPXXPP 834
P P + P P P PP PP P PP P AP PP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 652 GGXXXPPXPXATPGXXXGPXXGQRPXPXGXXPGXP-PPXXPPPPRXPXPPXXPP 810
G PP P + P P P P G P PP P PP P P P
Sbjct: 442 GAPAAPPLPPSAP---IAP-----PLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +1
Query: 676 PXATPGXXXGPXXGQRPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAPXXPP 834
P A P G P PP PP P P PP AP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 745 PGXPPPXXPPPPRXPXPPXXPPP 813
P PP P P PP PPP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPP 259
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 833 GGXXGAXGGGXXGGXGXRGGGGXXGGGXPG 744
GG G GG GG G GG GG G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1
Query: 833 GGXXGAXGGGXXGGXGXRGGGGXXGGGXPGXXPXGXGRW 717
G G GGG GG G GG GG G GR+
Sbjct: 156 GNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRGRF 194
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 326 GGGPXGXGGGXGXTXGGXXGXXGGGGXXG 412
GG G GG G G G GGG G
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGG 169
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +2
Query: 305 NXAGXEXGGGPXGXGGG-XGXTXGGXXGXXGGG 400
N G GG G GGG G + GG G GG
Sbjct: 157 NSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 721 RPXPXGXXPGXPPPXXPPPPRXPXPPXXPPPXAPXXP 831
RP P P P P P P P PP P P
Sbjct: 154 RPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLP 190
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = +2
Query: 281 PPPPXXX*NXAGXEXGGGP----XGXGGGXGXTXGGXXGXXGGGG 403
PPPP G GGG G GG G GG G GG G
Sbjct: 99 PPPPRGP--LFGPRIGGGHHGPLHGPHGGFGGRGGGRMGGRGGRG 141
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 736 GXXPGXPPPXXPPPP 780
G P PPP PPPP
Sbjct: 939 GVMPAFPPPPPPPPP 953
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 735 GXXPRXPPPXXPPPP 779
G P PPP PPPP
Sbjct: 939 GVMPAFPPPPPPPPP 953
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 326 GGGPXGXGGGXGXTXG-GXXGXXGGGGXXG 412
GGG G GG G G G G GGG G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.156 0.564
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,720,974
Number of Sequences: 5004
Number of extensions: 27125
Number of successful extensions: 506
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 313
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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