Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C09
         (936 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0487 + 16471538-16471540,16471694-16471795,16471880-164719...   133   2e-31
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460...    59   6e-09
04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590     57   2e-08
04_04_0303 + 24269467-24270741                                         31   1.00 
01_05_0607 + 23619271-23619426,23619479-23619552,23619917-236205...    29   4.0  

>04_03_0487 +
           16471538-16471540,16471694-16471795,16471880-16471908,
           16472619-16472745
          Length = 86

 Score =  133 bits (321), Expect = 2e-31
 Identities = 58/78 (74%), Positives = 65/78 (83%)
 Frame = +1

Query: 91  IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 270
           IDLL+P    E+ KHK KRLV  PNS+FMDVKC GC+ ITTVFSH+Q VVVC GC T+LC
Sbjct: 7   IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLC 66

Query: 271 QPTGGRARLTEGCSFRRK 324
           QPTGG+ARLTEGCSFRRK
Sbjct: 67  QPTGGKARLTEGCSFRRK 84


>02_03_0220 +
           16545571-16545573,16545717-16545818,16545980-16546008,
           16549421-16553036
          Length = 1249

 Score = 58.8 bits (136), Expect = 6e-09
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = +1

Query: 91  IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHA 228
           IDLL+P    E+ KHK KRLV  PNS+FMDVKC GC+ ++  F  A
Sbjct: 7   IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNMSVRFDIA 52


>04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590
          Length = 45

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 24/39 (61%), Positives = 29/39 (74%)
 Frame = +1

Query: 91  IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKI 207
           IDLL+P    E+ KHK KRLV  PNS+FMDVKC GC+ +
Sbjct: 7   IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFSM 45


>04_04_0303 + 24269467-24270741
          Length = 424

 Score = 31.5 bits (68), Expect = 1.00
 Identities = 22/68 (32%), Positives = 32/68 (47%)
 Frame = +1

Query: 88  AIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTIL 267
           A+ LLHP          L  ++PH  S  +D  CP  Y+I ++     RVV    C+++ 
Sbjct: 148 AVRLLHPFTGDTAELPPLGTVLPHLGSRLLD--CPAPYRIRSL----ARVV----CASVS 197

Query: 268 CQPTGGRA 291
           C  TG  A
Sbjct: 198 CSATGAGA 205


>01_05_0607 +
           23619271-23619426,23619479-23619552,23619917-23620594,
           23620711-23620815,23620877-23621003,23621613-23621773,
           23621858-23622028,23622195-23622324,23622532-23622747,
           23626821-23627348
          Length = 781

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = -1

Query: 222 TKNCCNLVTARALNIHEIRVRMWH*PLKLMFPPLRRRGRMQQINCERHGYSFNATTGKSK 43
           T +CC +  A  L+  E RV +   PL+++   L  RG + Q+N    G S  +T    K
Sbjct: 679 TAHCCFICRAGVLSAGECRVAVGVDPLEVL-DRLPDRGAVHQMNRREAGNSTRSTVRAPK 737

Query: 42  IL 37
           ++
Sbjct: 738 LV 739


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,624,862
Number of Sequences: 37544
Number of extensions: 290049
Number of successful extensions: 546
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)