BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_C09 (936 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_03_0487 + 16471538-16471540,16471694-16471795,16471880-164719... 133 2e-31 02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460... 59 6e-09 04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590 57 2e-08 04_04_0303 + 24269467-24270741 31 1.00 01_05_0607 + 23619271-23619426,23619479-23619552,23619917-236205... 29 4.0 >04_03_0487 + 16471538-16471540,16471694-16471795,16471880-16471908, 16472619-16472745 Length = 86 Score = 133 bits (321), Expect = 2e-31 Identities = 58/78 (74%), Positives = 65/78 (83%) Frame = +1 Query: 91 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 270 IDLL+P E+ KHK KRLV PNS+FMDVKC GC+ ITTVFSH+Q VVVC GC T+LC Sbjct: 7 IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLC 66 Query: 271 QPTGGRARLTEGCSFRRK 324 QPTGG+ARLTEGCSFRRK Sbjct: 67 QPTGGKARLTEGCSFRRK 84 >02_03_0220 + 16545571-16545573,16545717-16545818,16545980-16546008, 16549421-16553036 Length = 1249 Score = 58.8 bits (136), Expect = 6e-09 Identities = 26/46 (56%), Positives = 32/46 (69%) Frame = +1 Query: 91 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHA 228 IDLL+P E+ KHK KRLV PNS+FMDVKC GC+ ++ F A Sbjct: 7 IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNMSVRFDIA 52 >04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590 Length = 45 Score = 56.8 bits (131), Expect = 2e-08 Identities = 24/39 (61%), Positives = 29/39 (74%) Frame = +1 Query: 91 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKI 207 IDLL+P E+ KHK KRLV PNS+FMDVKC GC+ + Sbjct: 7 IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFSM 45 >04_04_0303 + 24269467-24270741 Length = 424 Score = 31.5 bits (68), Expect = 1.00 Identities = 22/68 (32%), Positives = 32/68 (47%) Frame = +1 Query: 88 AIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTIL 267 A+ LLHP L ++PH S +D CP Y+I ++ RVV C+++ Sbjct: 148 AVRLLHPFTGDTAELPPLGTVLPHLGSRLLD--CPAPYRIRSL----ARVV----CASVS 197 Query: 268 CQPTGGRA 291 C TG A Sbjct: 198 CSATGAGA 205 >01_05_0607 + 23619271-23619426,23619479-23619552,23619917-23620594, 23620711-23620815,23620877-23621003,23621613-23621773, 23621858-23622028,23622195-23622324,23622532-23622747, 23626821-23627348 Length = 781 Score = 29.5 bits (63), Expect = 4.0 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -1 Query: 222 TKNCCNLVTARALNIHEIRVRMWH*PLKLMFPPLRRRGRMQQINCERHGYSFNATTGKSK 43 T +CC + A L+ E RV + PL+++ L RG + Q+N G S +T K Sbjct: 679 TAHCCFICRAGVLSAGECRVAVGVDPLEVL-DRLPDRGAVHQMNRREAGNSTRSTVRAPK 737 Query: 42 IL 37 ++ Sbjct: 738 LV 739 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,624,862 Number of Sequences: 37544 Number of extensions: 290049 Number of successful extensions: 546 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 536 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 546 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2682675460 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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