Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C07
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   4.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   4.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   7.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   7.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   7.4  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 775 PXXPLHCFYGYDWKIYFGHLTSLLYNGHCL 686
           P  P H FY Y   +  GH   +L    CL
Sbjct: 483 PYTPWHTFYDYRPWVQHGHQELVLGGEVCL 512


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 547 IPDFPLXDHGNIRSWRHYNIYKPD 618
           I D P    G+  S +HYNI+  D
Sbjct: 33  ILDIPCKVCGDFSSGKHYNIFACD 56


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 547 IPDFPLXDHGNIRSWRHYNIYKPD 618
           I D P    G+  S +HYNI+  D
Sbjct: 33  ILDIPCKVCGDFSSGKHYNIFACD 56


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 325 VLRYKDVEIPNSTLYDY 375
           V+R    + PNS LYDY
Sbjct: 260 VIRQPPAKDPNSHLYDY 276


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 325 VLRYKDVEIPNSTLYDY 375
           V+R    + PNS LYDY
Sbjct: 260 VIRQPPAKDPNSHLYDY 276


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 557 KSGMFGSITATTSPSRTWNFLLRFAANVL 471
           +S +FG +T T   S+     LRF  N+L
Sbjct: 296 ESRIFGLVTFTPDRSKFRPSSLRFCLNIL 324


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 557 KSGMFGSITATTSPSRTWNFLLRFAANVL 471
           +S +FG +T T   S+     LRF  N+L
Sbjct: 21  QSRIFGLVTFTPDRSKFRPSSLRFCLNIL 49


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 378 YIIV*RTVRYFHVFITENLS 319
           +  V R + YF +FITE+ S
Sbjct: 220 FFTVPRVLMYFDIFITEHES 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,233
Number of Sequences: 336
Number of extensions: 3676
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)