Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C07
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 46 4e-05
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 44 1e-04
02_05_0403 - 28696043-28696153,28696245-28696347,28696443-286965... 40 0.002
04_03_0305 - 14125193-14125421,14125666-14127104 40 0.003
03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140,286... 36 0.033
02_05_1267 + 35342770-35343842,35344163-35344256,35344391-35344498 36 0.033
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 35 0.099
10_08_1051 - 22562840-22562971,22563474-22563576,22563701-225637... 32 0.70
08_01_0900 + 8867895-8868938,8869887-8870085,8871500-8871713,887... 31 0.93
01_06_1694 + 39246262-39247320,39247464-39247590,39248638-392487... 31 1.6
12_02_0357 + 17941898-17943691 30 2.8
08_02_1377 + 26530653-26530988,26533137-26533999,26534739-26535252 29 3.7
04_04_1568 - 34475707-34476822,34476894-34477083,34477330-344774... 29 4.9
03_02_0004 - 4869853-4871106 29 4.9
10_02_0152 - 5902554-5903058,5904171-5904670 29 6.5
07_03_0844 - 21971222-21971635 28 8.6
07_01_1136 + 10668637-10669665,10670259-10670282 28 8.6
06_01_0973 + 7530436-7530510,7530566-7531297 28 8.6
04_01_0533 - 6956275-6956372,6957106-6957232 28 8.6
03_01_0240 - 1862699-1864186,1864245-1864442 28 8.6
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 340 DVEIPNS-TLYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRD 516
D+EI NS TL +Y + + R + TG YTY + S AA LRR V
Sbjct: 18 DIEIDNSMTLQEYCFARMAEVGARPCLIDGQTGESYTYAEVESASRRAAAGLRR-MGVGK 76
Query: 517 GDVVAVMLPNIPDF 558
GDVV +L N P+F
Sbjct: 77 GDVVMSLLRNCPEF 90
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 557 FPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEACKMAKIDL 736
F +G G T+ NP YT HEV R + A+++VT E A+ K A+ +
Sbjct: 90 FAFSFLGAARLGAATTTANPFYTPHEVHRQAEAAGARVIVT--EACAVEKVREFAAERGV 147
Query: 737 PIITI 751
P++T+
Sbjct: 148 PVVTV 152
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 340 DVEIPNS-TLYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRD 516
D+EIP+ TL Y ++ L R + TG Y+Y + +LS AA LRR V
Sbjct: 22 DIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVYSYGEVEELSRRAAAGLRR-LGVGK 80
Query: 517 GDVVAVMLPNIPDF 558
GDVV +L N P+F
Sbjct: 81 GDVVMSLLRNCPEF 94
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 557 FPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEACKMAKIDL 736
F +G G T+ NP YT HE+ R + A+++VT E A+ K A +
Sbjct: 94 FAFTFLGAARLGAATTTANPFYTPHEIHRQASAAGARVIVT--EACAVEKVRGFAADRGI 151
Query: 737 PIITI 751
P++ +
Sbjct: 152 PVVAV 156
>02_05_0403 -
28696043-28696153,28696245-28696347,28696443-28696510,
28696582-28696727,28698038-28699124
Length = 504
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 340 DVEIPNST-LYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRD 516
D++IP+ L++Y + P+ + A TGR YT+ + L AA L R V
Sbjct: 34 DIDIPSHLPLHEYCFARAAELPDAPCLIAAATGRTYTFAETRLLCRRAAAALHR-LGVGH 92
Query: 517 GDVVAVMLPNIPDF 558
GD V V+L N +F
Sbjct: 93 GDRVMVLLQNCVEF 106
>04_03_0305 - 14125193-14125421,14125666-14127104
Length = 555
Score = 39.9 bits (89), Expect = 0.003
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +2
Query: 554 IFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEA 712
++P+ ++GI+ AG + + +NP A E+++ + SEAK+VV +K+A
Sbjct: 98 VYPVVSLGIMSAGAVFSGVNPRALAAEIKKQVEDSEAKLVVANEVAFDKVKDA 150
>03_01_0369 -
2863159-2863491,2864149-2864214,2865045-2865140,
2865530-2865632,2865771-2865838,2866570-2866712,
2867050-2867242,2867602-2867640,2867742-2867807,
2868617-2869651
Length = 713
Score = 36.3 bits (80), Expect = 0.033
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +2
Query: 554 IFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEACKMAKID 733
++P+ + G + T++NP YT E+ + + + AK+V+T+ V K+A +
Sbjct: 98 LYPVCFFAVTALGAVGTTVNPDYTPREIAKQVSDARAKLVITISALVP------KIAGLR 151
Query: 734 LPIITI 751
LP+I +
Sbjct: 152 LPVILL 157
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 352 PNSTLYDYVWKNLERWPERT-MAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVV 528
P +L D + + + P +A A GR T+ + + A L + VR GD V
Sbjct: 30 PGLSLTDLLLRRADACPSAVALADAAAGGRALTFAELRSAVLSTAVALSSRAGVRPGDAV 89
Query: 529 AVMLPNIPDFPL 564
++ PN +P+
Sbjct: 90 LLLAPNCVLYPV 101
>02_05_1267 + 35342770-35343842,35344163-35344256,35344391-35344498
Length = 424
Score = 36.3 bits (80), Expect = 0.033
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 548 SQIFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPE 688
S + P +G+L AGG++ + +P TA EV S A +VV PE
Sbjct: 89 SLLLPPIVLGVLAAGGVVVAADPGSTAEEVATVARSSGAVVVVAAPE 135
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 34.7 bits (76), Expect = 0.099
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 331 RYKDVEIPNST-LYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQ 507
R D+ IP+ L+DYV++ L +R + TG ++ LS AA L
Sbjct: 13 RLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALSRRVAAGL-SSIG 71
Query: 508 VRDGDVVAVMLPNIPDF 558
V G V ++LPN +F
Sbjct: 72 VCHGSTVMLLLPNSVEF 88
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 590 GGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVA 697
G + T+ NP++T E+ + + S A +VVT P VA
Sbjct: 99 GAVTTTANPLHTPPEIAKQVAASGATVVVTEPAFVA 134
>10_08_1051 -
22562840-22562971,22563474-22563576,22563701-22563768,
22563896-22564053,22564706-22564895,22565162-22566205
Length = 564
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 352 PNSTLYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVA 531
P+ +L +++ +L ++ V A T + +L ++ AA LRR+ + G +V
Sbjct: 36 PSLSLVPHLFSHLPLH-HHSLLVDAPTAATLSCADFRRLVSSLAAGLRRRLHIARGSLVL 94
Query: 532 VMLPNIPDFPL 564
++LPN FP+
Sbjct: 95 LLLPNSLTFPV 105
>08_01_0900 +
8867895-8868938,8869887-8870085,8871500-8871713,
8871854-8871959,8872077-8872199
Length = 561
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 542 QTSQIFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVT 679
+ S F L G +T+ NP+ T HE++ L + A +V+T
Sbjct: 96 RNSPEFVLSFFAASRVGAAVTTANPMSTPHEIESQLAAAGATVVIT 141
>01_06_1694 +
39246262-39247320,39247464-39247590,39248638-39248783,
39248898-39248965,39249055-39249157,39249616-39249741
Length = 542
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 560 PLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKE 709
P+ ++ G +++ NP+ T E + LS + PE A + E
Sbjct: 113 PVLDFALMSIGAVVSPANPVSTPEEYAHQVALSRPVVAFAAPEVAAKLPE 162
>12_02_0357 + 17941898-17943691
Length = 597
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 539 SITATTSPSRTWNFLLRFAANVLESLKPCSYVYPRPVVAQTAIVLS---GHL 393
SI S WN+ R A L + Y +PRP +A TA++L+ GHL
Sbjct: 375 SINTFVSLISIWNYAGRVGAGYLSEMLLARYRFPRP-LALTAVLLASCVGHL 425
>08_02_1377 + 26530653-26530988,26533137-26533999,26534739-26535252
Length = 570
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -2
Query: 506 WNFLLRFAANVLESLKPCSYVYPRPVVAQTAIVLS--GHLS 390
WNFL R L Y YPR + TA V GH S
Sbjct: 383 WNFLGRIGGGYFSELIVKDYAYPRAIALATAQVFMAFGHFS 423
>04_04_1568 -
34475707-34476822,34476894-34477083,34477330-34477464,
34477571-34477668,34477789-34477979,34478784-34479286,
34480169-34481568,34481655-34481855
Length = 1277
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 442 YTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIP 552
+T+ Q + A+ L + GDVV+V+LPN+P
Sbjct: 40 FTWSQTHRRCLRLASALVSSLGISRGDVVSVLLPNVP 76
>03_02_0004 - 4869853-4871106
Length = 417
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 509 TWNFLLRFAANVLESLKPCSYVYPRPVVAQTAIVLSGH 396
+W FLL A V L+PC+ P A AI +G+
Sbjct: 238 SWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQATGY 275
>10_02_0152 - 5902554-5903058,5904171-5904670
Length = 334
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 493 RRKFQVRDGDVVAVMLP 543
RR+F+ RDGDVV LP
Sbjct: 53 RRRFEARDGDVVVASLP 69
>07_03_0844 - 21971222-21971635
Length = 137
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 570 VXKGKIWDVW*HHSHDVSIADLELPSKVCC 481
+ G I +V+ H HD ++ +LE KV C
Sbjct: 60 ISNGDISEVFDHRMHDTNVQELERACKVAC 89
>07_01_1136 + 10668637-10669665,10670259-10670282
Length = 350
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 400 PERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPL 564
P V A TG +++ A LR + +R GDV V+ P D P+
Sbjct: 59 PANPALVDAATGEAVSFQAFLSRVRALAGALRSRVGLRGGDVAFVLAPAGLDVPV 113
>06_01_0973 + 7530436-7530510,7530566-7531297
Length = 268
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 657 PKPKSWLHCRRQWPL*RRLVRWPK 728
PKP W +C WP L+ W K
Sbjct: 2 PKPSGWPNCSTGWPNVASLLHWLK 25
>04_01_0533 - 6956275-6956372,6957106-6957232
Length = 74
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 398 GPRGLWRSAPPQAVG 442
GPRGLWR++P VG
Sbjct: 30 GPRGLWRASPELVVG 44
>03_01_0240 - 1862699-1864186,1864245-1864442
Length = 561
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 587 AGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEACKM---AKIDLPII 745
AGG++ ++N + A V L SEAK+ + + +A+ +A ++ AK P++
Sbjct: 98 AGGVLCTLNTRHDAAMVSVLLRHSEAKVFLVESQFLAVAHDALRLLADAKAKFPLV 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,656,509
Number of Sequences: 37544
Number of extensions: 388971
Number of successful extensions: 1003
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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