Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C07
(888 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 / 4-coumaroyl... 55 5e-08
At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 / 4-coumaroyl... 55 5e-08
At3g21240.1 68416.m02684 4-coumarate--CoA ligase 2 / 4-coumaroyl... 49 5e-06
At1g65060.2 68414.m07376 4-coumarate--CoA ligase 3 / 4-coumaroyl... 44 1e-04
At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 / 4-coumaroyl... 44 1e-04
At4g05160.1 68417.m00775 4-coumarate--CoA ligase, putative / 4-c... 42 7e-04
At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative / 4-c... 38 0.007
At1g20480.1 68414.m02552 4-coumarate--CoA ligase family protein ... 38 0.009
At1g20510.2 68414.m02556 4-coumarate--CoA ligase family protein ... 37 0.021
At1g20510.1 68414.m02555 4-coumarate--CoA ligase family protein ... 37 0.021
At3g01930.2 68416.m00144 nodulin family protein similar to nodul... 32 0.44
At3g01930.1 68416.m00143 nodulin family protein similar to nodul... 32 0.44
At5g14120.1 68418.m01652 nodulin family protein similar to nodul... 31 0.77
At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein ... 31 1.4
At1g62940.1 68414.m07107 4-coumarate--CoA ligase family protein ... 31 1.4
At2g39210.1 68415.m04816 nodulin family protein similar to nodul... 30 1.8
At1g20490.1 68414.m02553 AMP-dependent synthetase and ligase fam... 29 5.4
At1g51805.1 68414.m05838 leucine-rich repeat protein kinase, put... 28 7.2
At4g29550.1 68417.m04214 expressed protein contains Pfam profile... 28 9.5
At2g38050.1 68415.m04671 3-oxo-5-alpha-steroid 4-dehydrogenase, ... 28 9.5
At1g20500.1 68414.m02554 4-coumarate--CoA ligase family / 4-coum... 28 9.5
>At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 490
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 340 DVEIPNS-TLYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRD 516
D+ IPN +L+DY+++N+ + + + TG YTY +S AAN K V
Sbjct: 31 DIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANF-HKLGVNQ 89
Query: 517 GDVVAVMLPNIPDFPL 564
DVV ++LPN P+F L
Sbjct: 90 NDVVMLLLPNCPEFVL 105
>At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 561
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 340 DVEIPNS-TLYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRD 516
D+ IPN +L+DY+++N+ + + + TG YTY +S AAN K V
Sbjct: 31 DIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANF-HKLGVNQ 89
Query: 517 GDVVAVMLPNIPDFPL 564
DVV ++LPN P+F L
Sbjct: 90 NDVVMLLLPNCPEFVL 105
>At3g21240.1 68416.m02684 4-coumarate--CoA ligase 2 /
4-coumaroyl-CoA synthase 2 (4CL2) identical to SP|Q9S725
4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)
(4-coumaroyl-CoA synthase 2) {Arabidopsis thaliana}
Length = 556
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 331 RYKDVEIPNST-LYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQ 507
R D+ IPN L+DY+++N+ + + + TG YTY S AA L
Sbjct: 26 RLPDIYIPNHLPLHDYIFENISEFAAKPCLINGPTGEVYTYADVHVTSRKLAAGL-HNLG 84
Query: 508 VRDGDVVAVMLPNIPDFPL 564
V+ DVV ++LPN P+ L
Sbjct: 85 VKQHDVVMILLPNSPEVVL 103
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 590 GGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIK 706
G I TS NP +T E+ + S AK++VT V IK
Sbjct: 112 GAITTSANPFFTPAEISKQAKASAAKLIVTQSRYVDKIK 150
>At1g65060.2 68414.m07376 4-coumarate--CoA ligase 3 /
4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777
4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3)
(4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana}
Length = 495
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 340 DVEIPNST-LYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRD 516
D++IPN L+ Y ++ L ++ + +TG+ YTY + + A+ L K +R
Sbjct: 41 DIDIPNHLPLHTYCFEKLSSVSDKPCLIVGSTGKSYTYGETHLICRRVASGL-YKLGIRK 99
Query: 517 GDVVAVMLPNIPDF 558
GDV+ ++L N +F
Sbjct: 100 GDVIMILLQNSAEF 113
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 542 QTSQIFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIK 706
Q S F MG G + T+ NP YT+ E+ + L S AK+++T + V +K
Sbjct: 108 QNSAEFVFSFMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYVDKLK 162
>At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 /
4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777
4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3)
(4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana}
Length = 561
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 340 DVEIPNST-LYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRD 516
D++IPN L+ Y ++ L ++ + +TG+ YTY + + A+ L K +R
Sbjct: 41 DIDIPNHLPLHTYCFEKLSSVSDKPCLIVGSTGKSYTYGETHLICRRVASGL-YKLGIRK 99
Query: 517 GDVVAVMLPNIPDF 558
GDV+ ++L N +F
Sbjct: 100 GDVIMILLQNSAEF 113
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 542 QTSQIFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIK 706
Q S F MG G + T+ NP YT+ E+ + L S AK+++T + V +K
Sbjct: 108 QNSAEFVFSFMGASMIGAVSTTANPFYTSQELYKQLKSSGAKLIITHSQYVDKLK 162
>At4g05160.1 68417.m00775 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative similar to 4CL2
[gi:12229665] from Arabidopsis thaliana, 4CL1
[gi:12229631] from Nicotiana tabacum; contains Pfam
AMP-binding enzyme domain PF00501; acyl-activating
enzyme superfamily; identical to cDNA 4-coumarate-CoA
ligase-like protein (At4g05160) GI:29893226
Length = 544
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 557 FPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEACKMAKIDL 736
FPL + + GG+ T+ NP+YT +EV + + S KI++++ + IK DL
Sbjct: 92 FPLCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKIIISVNQLFDKIK------GFDL 145
Query: 737 PIITI 751
P++ +
Sbjct: 146 PVVLL 150
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 352 PNSTLYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVA 531
PN++L ++++N +P + + TG T+ Q K + A+ + +R DVV
Sbjct: 25 PNTSLVSFLFRNSSSYPSKLAIADSDTGDSLTFSQ-LKSAVARLAHGFHRLGIRKNDVVL 83
Query: 532 VMLPNIPDFPL 564
+ PN FPL
Sbjct: 84 IFAPNSYQFPL 94
>At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative (4CL) similar to 4CL2
[gi:12229665] and 4CL1 [gi:12229649] from [Arabidopsis
thaliana], 4CL1 [gi:12229631] from Nicotiana tabacum
Length = 570
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +1
Query: 340 DVEIPNST-LYDYVWKNL----ERWPERTMAVCATTGRGYTYEQGFKLSNTFAANLRRKF 504
D+ IPN L DYV++ + T + TGR TY AA + R
Sbjct: 35 DIFIPNHLPLTDYVFQRFSGDGDGDSSTTCIIDGATGRILTYADVQTNMRRIAAGIHR-L 93
Query: 505 QVRDGDVVAVMLPNIPDFPL 564
+R GDVV ++LPN P+F L
Sbjct: 94 GIRHGDVVMLLLPNSPEFAL 113
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 557 FPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVT 679
F L + + G + T+ NP YT E+ + S AK+++T
Sbjct: 111 FALSFLAVAYLGAVSTTANPFYTQPEIAKQAKASAAKMIIT 151
>At1g20480.1 68414.m02552 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
SP|Q9S725 from Arabidopsis thaliana and SP|P17814 from
Oryza sativa; contains Pfam AMP-binding enzyme domain
PF00501
Length = 565
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +2
Query: 548 SQIFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEACKMAK 727
S +FP+ ++ ++ G IIT+ NPI T+ E+ + + S + T T ++ + +
Sbjct: 109 SILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFT---TCKLVSKLAAASN 165
Query: 728 IDLPII 745
+LP++
Sbjct: 166 FNLPVV 171
>At1g20510.2 68414.m02556 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
SP|P14912 and SP|P14913 from Petroselinum crispum;
contains Pfam AMP-binding enzyme domain PF00501
Length = 473
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 548 SQIFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEACKMAK 727
S +FP+ + ++ G IIT+ NP+ T++E+ + + S + T + + I A K
Sbjct: 92 SILFPVVCLSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLP 151
Query: 728 IDL 736
I L
Sbjct: 152 IVL 154
>At1g20510.1 68414.m02555 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
SP|P14912 and SP|P14913 from Petroselinum crispum;
contains Pfam AMP-binding enzyme domain PF00501
Length = 546
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 548 SQIFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETVAIIKEACKMAK 727
S +FP+ + ++ G IIT+ NP+ T++E+ + + S + T + + I A K
Sbjct: 92 SILFPVVCLSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLP 151
Query: 728 IDL 736
I L
Sbjct: 152 IVL 154
>At3g01930.2 68416.m00144 nodulin family protein similar to
nodulin-like protein [Arabidopsis thaliana] GI:3329368,
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 584
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 506 WNFLLRFAANVLESLKPCSYVYPRPV-VAQTAIVLS-GHL 393
WNFL R L Y YPRPV +A +V+S GH+
Sbjct: 412 WNFLGRIGGGYFSELIVRDYAYPRPVAIAVAQLVMSVGHI 451
>At3g01930.1 68416.m00143 nodulin family protein similar to
nodulin-like protein [Arabidopsis thaliana] GI:3329368,
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 471
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 506 WNFLLRFAANVLESLKPCSYVYPRPV-VAQTAIVLS-GHL 393
WNFL R L Y YPRPV +A +V+S GH+
Sbjct: 299 WNFLGRIGGGYFSELIVRDYAYPRPVAIAVAQLVMSVGHI 338
>At5g14120.1 68418.m01652 nodulin family protein similar to
nodulin-like protein [Arabidopsis thaliana] GI:3329368,
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 579
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 506 WNFLLRFAANVLESLKPCSYVYPRPV-VAQTAIVLS-GHL 393
WNFL R L Y YPRPV +A +++S GH+
Sbjct: 407 WNFLGRIGGGYFSELVVRDYAYPRPVAMAVAQLIMSVGHI 446
>At4g19010.1 68417.m02802 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL
from Pinus taeda, gi:515503, gi:1143308; contains Pfam
AMP-binding enzyme domain PF00501
Length = 566
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 409 TMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPNIPDFPL 564
T + + TG ++ + + + AA + VR GDVV+++LPN FP+
Sbjct: 62 TALIDSLTGFSISHTELQIMVQSMAAGIYHVLGVRQGDVVSLVLPNSVYFPM 113
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 548 SQIFPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVTLPETV 694
S FP+ + ++ G I+T++NP + E+++ + + T E V
Sbjct: 108 SVYFPMIFLSLISLGAIVTTMNPSSSLGEIKKQVSECSVGLAFTSTENV 156
>At1g62940.1 68414.m07107 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
gi:112801 from Petroselinum crispum, GB:AAD40664 from
[Solanum tuberosum] (J. Biol. Chem. 266 (13), 8551-8559
(1991)); contains Pfam AMP-binding enzyme domain PF00501
Length = 542
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +2
Query: 557 FPLXTMGILEAGGIITSINPIYTAHEVQRXLVLSEAKIVVT 679
+ + +GI+ AGG+ + NP E+++ + S A+ ++T
Sbjct: 91 YGIIALGIMSAGGVFSGANPTALVSEIKKQVEASGARGIIT 131
>At2g39210.1 68415.m04816 nodulin family protein similar to
nodulin-like protein [Arabidopsis thaliana] GI:3329368,
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 601
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 539 SITATTSPSRTWNFLLRFAANVLESLKPCSYVYPRPVVAQTAIVLS--GHL 393
S++ S WN+ R + V+ + Y +PRP++ ++LS GHL
Sbjct: 379 SVSTFVSLVSIWNYYGRVVSGVVSEIFLIKYKFPRPLMLTMVLLLSCAGHL 429
>At1g20490.1 68414.m02553 AMP-dependent synthetase and ligase family
protein similar to SP|Q42524 and SP|Q9S725; contains
Pfam AMP-binding enzyme domain PF00501
Length = 447
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 400 PER--TMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPN 546
P+R T + A+TG T+ +++ + A L + +R GDVV ++ PN
Sbjct: 48 PQRGTTAFIDASTGHRLTFSDLWRVVDRVADCLYHEVGIRRGDVVLILSPN 98
>At1g51805.1 68414.m05838 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 884
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 298 VFGVLIM**VLRYKDVEIPNSTLYDYVWKNLERWPERTMAVCATTGRGYTYEQGFKLSNT 477
+ G LI+ V R K TL Y+ + R P + T + +TY Q ++N
Sbjct: 519 IIGALILFLVFRKKKASKVEGTLPSYMQASDGRSPRSSEPAIVTKNKRFTYSQVVIMTNN 578
Query: 478 F 480
F
Sbjct: 579 F 579
>At4g29550.1 68417.m04214 expressed protein contains Pfam profile
PF04776: Protein of unknown function (DUF626)
Length = 358
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 340 DVEIPNSTLYDYVWKNLERWPERTMAVCATTG-RGYTYEQGFKL 468
D+ IP S+LY Y N + + +CA G Y +++G L
Sbjct: 104 DIRIPTSSLYVYKCANNDDLRGDIVGICARVGLHWYNFQKGSNL 147
>At2g38050.1 68415.m04671 3-oxo-5-alpha-steroid 4-dehydrogenase,
putative / steroid 5-alpha-reductase, putative identical
to gi:1280611; contains a steroid 5-alpha reductase,
C-terminal domain
Length = 262
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 722 PSYKPPL*WPLSPAM*PRFWLRIIQXAFGLHAL 624
P+ PP+ W + + P WL ++ FG HAL
Sbjct: 45 PTVSPPIAWFVMES--PTLWLTLLLFPFGRHAL 75
>At1g20500.1 68414.m02554 4-coumarate--CoA ligase family /
4-coumaroyl-CoA synthase family similar to SP|Q42524 and
SP|Q9S725; contains Pfam AMP-binding enzyme domain
PF00501
Length = 412
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 406 RTMAVCATTGRGYTYEQGFKLSNTFAANLRRKFQVRDGDVVAVMLPN 546
+T + A TG+ T+ ++ + A L + +R GDVV ++ PN
Sbjct: 52 KTAFIDAATGQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPN 98
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,877,444
Number of Sequences: 28952
Number of extensions: 314881
Number of successful extensions: 822
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -