Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C06
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   1.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   4.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 190 NPHIYHLASLLRLF*VPEQLLTTVRRPPW 104
           NP I  L + +  + VPE  ++T  RP W
Sbjct: 384 NPLINILYANMNSYSVPEPTISTTPRPEW 412


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 210 PGIYVIPIRISIILRAYSDYFRCQSSY*P 124
           P +Y+IP+ + +I   + + F  ++SY P
Sbjct: 8   PTLYLIPVSVILISVGWWENFVSETSYLP 36


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 210 PGIYVIPIRISIILRAYSDYFRCQSSY*P 124
           P +Y+IP+ + +I   + + F  ++SY P
Sbjct: 241 PTLYLIPVSVILISVGWWENFVSETSYLP 269


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 210 PGIYVIPIRISIILRAYSDYFRCQSSY*P 124
           P +Y+IP+ + +I   + + F  ++SY P
Sbjct: 241 PTLYLIPVSVILISVGWWENFVSETSYLP 269


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 29  GIP*DFEYPGTNGARARD 82
           G   D+EYPG  G  A D
Sbjct: 140 GFDLDWEYPGQRGGAAAD 157


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = +2

Query: 401 NCTAPGCCVPKCFAEKGNRGFPGSPGP 481
           +C    C +P CF        PG   P
Sbjct: 154 DCDPTQCVLPDCFCSADGTRIPGQLEP 180



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 197 TYIPGXLPPTNWPREVAPDTERPYAVNQYGLY 292
           T IPG L P N P+ +         V+   LY
Sbjct: 172 TRIPGQLEPANVPQMITLTFNGAVNVDNIDLY 203


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = +2

Query: 401 NCTAPGCCVPKCFAEKGNRGFPGSPGP 481
           +C    C +P CF        PG   P
Sbjct: 161 DCDPTQCVLPDCFCSADGTRIPGQLEP 187


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = +2

Query: 404 CTAPGCCVPKCFAEKGNRGFPG 469
           C    C +P CF  +     PG
Sbjct: 163 CDPAVCVLPDCFCSEDGTTIPG 184


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 111 HHGTKRAAPESRAR 70
           HH T++  PE R R
Sbjct: 334 HHATRKMGPEFRER 347


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 111 HHGTKRAAPESRAR 70
           HH T++  PE R R
Sbjct: 334 HHATRKMGPEFRER 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,148
Number of Sequences: 336
Number of extensions: 5058
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)