Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_C05
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161     87   1e-17
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764...    76   4e-14
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           75   1e-13
07_01_1001 - 8460467-8460799                                           60   2e-09
07_03_0321 + 16757414-16757743                                         58   1e-08
12_02_1217 + 27082452-27083593,27085041-27085158                       29   5.1  

>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
          Length = 113

 Score = 87.4 bits (207), Expect = 1e-17
 Identities = 39/70 (55%), Positives = 56/70 (80%)
 Frame = +1

Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
           M+ +AAYLLAVLGG  +P+A D++  L SVG+EA+ E L+ +++EL GKD+ ++IAAGRE
Sbjct: 1   MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60

Query: 286 KLSSMPVGGG 315
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>02_04_0074 -
           19474786-19474812,19475174-19475400,19476362-19476496,
           19478662-19479193
          Length = 306

 Score = 75.8 bits (178), Expect = 4e-14
 Identities = 32/71 (45%), Positives = 51/71 (71%)
 Frame = +1

Query: 103 KMRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGR 282
           +M++++AYLLA L G   P+A D+   L SVG E D   ++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252

Query: 283 EKLSSMPVGGG 315
           EK +S+P GGG
Sbjct: 253 EKFASVPCGGG 263


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 31/70 (44%), Positives = 50/70 (71%)
 Frame = +1

Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
           M++++AYL+A L G  +P A D+   L SVG E D   ++ ++++++GKD+ +LIA GRE
Sbjct: 1   MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60

Query: 286 KLSSMPVGGG 315
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>07_01_1001 - 8460467-8460799
          Length = 110

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 28/68 (41%), Positives = 43/68 (63%)
 Frame = +1

Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
           MR+VAAYL+A +GG  +P   DV   L +VG + D + L  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60

Query: 286 KLSSMPVG 309
            L+   VG
Sbjct: 61  MLAFGGVG 68


>07_03_0321 + 16757414-16757743
          Length = 109

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = +1

Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
           MR+VAAYL+A +GG  +P   DV   L +VG + D + L  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60

Query: 286 KLS 294
            L+
Sbjct: 61  MLA 63


>12_02_1217 + 27082452-27083593,27085041-27085158
          Length = 419

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 124 YLLAVLGGKXTPAAADVEXXLSSVGIEADGEXL 222
           Y+LA+     TPA +D E     VG +ADG+ L
Sbjct: 27  YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,749,995
Number of Sequences: 37544
Number of extensions: 184679
Number of successful extensions: 383
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)