BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_C05 (910 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17 SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0 >SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 762 Score = 87.0 bits (206), Expect = 2e-17 Identities = 40/69 (57%), Positives = 53/69 (76%) Frame = +1 Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285 MRYVAAYLLA LG P+A D++ L SVGIE+D E L KVI+EL+GK V+++I AG+ Sbjct: 650 MRYVAAYLLATLGNNKNPSAKDIKGILDSVGIESDMERLNKVISELSGKSVDEIIQAGKS 709 Query: 286 KLSSMPVGG 312 KL+++P GG Sbjct: 710 KLATVPTGG 718 >SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 956 Score = 29.9 bits (64), Expect = 3.0 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 7/61 (11%) Frame = -3 Query: 314 PPPTGIDDSFSRPAAISCST-------SLPLSSVITFLSXSPSASIPTELRXXSTSAAAG 156 P PT SF PAA + +T SLP S TF S SP+A +L + +AA+ Sbjct: 880 PAPTAGGFSFGNPAAPAATTGGFKFGASLPAPSGFTFGSTSPAAPAFGQLATAAGTAASS 939 Query: 155 V 153 V Sbjct: 940 V 940 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,753,435 Number of Sequences: 59808 Number of extensions: 182623 Number of successful extensions: 304 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 290 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 304 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2621784220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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