Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C05
(910 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 90 1e-17
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 90 1e-17
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 90 1e-17
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 90 1e-17
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 90 1e-17
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 90 1e-17
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 90 1e-17
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 90 1e-17
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 33 1.1
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 33 1.1
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 33 1.1
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
MRYVA+YLLA LGG +P+A D++ L SVGIEAD + L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 286 KLSSMPVGG 312
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
MRYVA+YLLA LGG +P+A D++ L SVGIEAD + L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 286 KLSSMPVGG 312
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
MRYVA+YLLA LGG +P+A D++ L SVGIEAD + L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 286 KLSSMPVGG 312
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
MRYVA+YLLA LGG +P+A D++ L SVGIEAD + L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 286 KLSSMPVGG 312
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
MRYVA+YLLA LGG +P+A D++ L SVGIEAD + L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 286 KLSSMPVGG 312
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
MRYVA+YLLA LGG +P+A D++ L SVGIEAD + L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 286 KLSSMPVGG 312
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
MRYVA+YLLA LGG +P+A D++ L SVGIEAD + L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 286 KLSSMPVGG 312
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 89.8 bits (213), Expect = 1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 106 MRYVAAYLLAVLGGKXTPAAADVEXXLSSVGIEADGEXLKKVITELNGKDVEQLIAAGRE 285
MRYVA+YLLA LGG +P+A D++ L SVGIEAD + L KVI+ELNGK++E +IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 286 KLSSMPVGG 312
KL+S+P GG
Sbjct: 61 KLASVPAGG 69
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 33.5 bits (73), Expect = 1.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 311 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSXSPSASIPTELRXXSTSAAAGVXLPPST 135
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 134 ASKYAA 117
+ +A+
Sbjct: 723 SHTHAS 728
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 33.5 bits (73), Expect = 1.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 311 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSXSPSASIPTELRXXSTSAAAGVXLPPST 135
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 134 ASKYAA 117
+ +A+
Sbjct: 723 SHTHAS 728
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 33.5 bits (73), Expect = 1.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 311 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSXSPSASIPTELRXXSTSAAAGVXLPPST 135
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 141 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 200
Query: 134 ASKYAA 117
+ +A+
Sbjct: 201 SHTHAS 206
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 33.5 bits (73), Expect = 1.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 311 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSXSPSASIPTELRXXSTSAAAGVXLPPST 135
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 301 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 360
Query: 134 ASKYAA 117
+ +A+
Sbjct: 361 SHTHAS 366
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,458,437
Number of Sequences: 237096
Number of extensions: 997373
Number of successful extensions: 1762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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