Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C04
(851 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 105 1e-21
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 71 3e-11
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 66 8e-10
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 66 1e-09
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 61 4e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 1e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 52 1e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.020
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.079
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 40 0.11
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 37 0.74
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.2
UniRef50_Q3KE73 Cluster: Transcriptional Regulator, LysR family;... 33 9.1
UniRef50_A5P062 Cluster: Putative uncharacterized protein; n=2; ... 33 9.1
UniRef50_Q7XPH0 Cluster: OSJNBb0003B01.13 protein; n=2; Oryza sa... 33 9.1
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 105 bits (252), Expect = 1e-21
Identities = 45/55 (81%), Positives = 46/55 (83%)
Frame = +2
Query: 626 PWKLPRALSCFRPCRLPDTCPPFSLREAWRFLIAHAVGISXRCXSFAPSWAVCTN 790
P + P FRPCRLPDTCPPFSLREAWRFLIAHAVGIS RC SFAPSWAVCTN
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTN 103
Score = 83.0 bits (196), Expect = 9e-15
Identities = 55/104 (52%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +1
Query: 550 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF------PTLPLTGYLSAFLPSGSV 711
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF T P A+ +
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 712 ALSHSSRCRYLXSVXVVRSKLGCVHEPPVXPDRXALSGTIVLSP 843
A+ S RCR V C + PP P TIVLSP
Sbjct: 84 AVGISVRCRSFAPSWAV-----CTN-PPFSPTAAPYPVTIVLSP 121
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +1
Query: 550 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 657
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLF 95
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 67.3 bits (157), Expect = 5e-10
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 658 PTLPLTGYLSAFLPSGSVALSHSSRCRYLXSV 753
PTLPLTGYLSAFLPSGSVALSHSSRCRYL SV
Sbjct: 6 PTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 66.5 bits (155), Expect = 8e-10
Identities = 30/36 (83%), Positives = 31/36 (86%)
Frame = +1
Query: 550 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 657
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF 127
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 314 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 412
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = -2
Query: 799 ERGVRAHSPAWSERXTPX*DTYSVSYEKAPRFPKGERRTGIR*AAGSETGERTRELPG 626
ERGVRA+SPAWSER P DT SVSYEKAPRFPKG++ + +G G R G
Sbjct: 25 ERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = -1
Query: 704 PEGRKADRYPVSGRVGNRRAHEGASRGKRLVSL*SCRVSPPLT 576
P+G+KA++ + NRRAHEGA+ K SL PPLT
Sbjct: 57 PKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
Score = 34.3 bits (75), Expect = 4.0
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 849 PGWTQDDSTG*GXAVGXNGGF-VHTAQLGANDXHRXEIPTA*AMRKRHASRREKGGQVSG 673
PGWTQDDS G + G ++ + + + + +K QVSG
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSG 67
Query: 672 KRQGRKQESARGSFQGETP 616
KRQGR + + G+ ++P
Sbjct: 68 KRQGRNRRAHEGAAGEKSP 86
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/57 (64%), Positives = 38/57 (66%)
Frame = -2
Query: 547 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIXLILWITVLPPLSELIPLAAAERP 377
RGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 290 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 448
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/62 (48%), Positives = 33/62 (53%)
Frame = +2
Query: 605 IKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLREAWRFLIAHAVGISXRCXSFAPSWAVC 784
+KI VS LP ALSC P PPFSL + + GIS RC SFAPSWAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 785 TN 790
N
Sbjct: 92 KN 93
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 92 DPDMIRYIDEFGQTTTRMQ 148
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 43.2 bits (97), Expect = 0.009
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 514 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFP 660
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLFP
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFP 113
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.020
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 216 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 338
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.079
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 360 ERGSGRAPNTQTASPRALADSLMQ 289
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 39.5 bits (88), Expect = 0.11
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -2
Query: 799 ERGVRAHSPAWSERXTP 749
ERGVRAHSPAWSER TP
Sbjct: 25 ERGVRAHSPAWSERPTP 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 36.7 bits (81), Expect = 0.74
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2
Query: 799 ERGVRAHSPAWSERXTPX*DT 737
ERGV A+SPAWSER TP DT
Sbjct: 25 ERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.2
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q3KE73 Cluster: Transcriptional Regulator, LysR family;
n=2; Pseudomonas fluorescens|Rep: Transcriptional
Regulator, LysR family - Pseudomonas fluorescens (strain
PfO-1)
Length = 297
Score = 33.1 bits (72), Expect = 9.1
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 527 FHRLRPPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCFRPCRLPDTCPPFSLRE 706
+ L P R + S+LK +A P R I P ++ LP++L+ R C LPD P L E
Sbjct: 72 YEALEPVQRLA--SSLKQYLAPPLRIIGTPPLAQQLLPQSLAALRRC-LPDV-PCTLLSE 127
Query: 707 AWRFLIAH 730
R ++ H
Sbjct: 128 PTRDIVRH 135
>UniRef50_A5P062 Cluster: Putative uncharacterized protein; n=2;
Proteobacteria|Rep: Putative uncharacterized protein -
Methylobacterium sp. 4-46
Length = 829
Score = 33.1 bits (72), Expect = 9.1
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +3
Query: 492 PGTVKRPRCWRFSIGSAPLXEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVSDPAA 671
PG PR R S G A ++RR + R+P G R P + R P S P
Sbjct: 723 PGPPPAPRAPRRSAGPARPARRRRSRRCGRSSRSPAGRRRAPGTRPRRAAGRRPASGPCR 782
Query: 672 YR 677
+R
Sbjct: 783 WR 784
>UniRef50_Q7XPH0 Cluster: OSJNBb0003B01.13 protein; n=2; Oryza
sativa|Rep: OSJNBb0003B01.13 protein - Oryza sativa
(Rice)
Length = 1144
Score = 33.1 bits (72), Expect = 9.1
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -1
Query: 815 AQRSG*TGGSCTQPSLERTTYTEXRYLQREL*ESATLPEGRKADRYPVSGRVGNRRAHEG 636
AQR TGG T RT+ T +R SAT+ R++ SG G+RR H+G
Sbjct: 76 AQRQLATGGRSTAAGTSRTSVTLSSSARRRARRSATI--SRRSTVPTSSGATGSRRRHDG 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,951,828
Number of Sequences: 1657284
Number of extensions: 15144454
Number of successful extensions: 41813
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 39832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41776
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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