Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_C03
(899 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 139 3e-33
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.052
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.052
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.052
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.052
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 30 2.0
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 139 bits (336), Expect = 3e-33
Identities = 66/121 (54%), Positives = 82/121 (67%)
Frame = +3
Query: 114 SGGXAVLALNXXAVTKMLAATXXLGAXXVNFQXEXYVYKRRADGTHVXNLRRTWXKXXXX 293
SGG A AL V K+LA LG+ +NFQ + YVYKRR DG ++ N+++TW K
Sbjct: 2 SGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLA 61
Query: 294 XXXXXXIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRS 473
+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 62 ARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRL 121
Query: 474 L 476
L
Sbjct: 122 L 122
Score = 123 bits (296), Expect = 2e-28
Identities = 61/137 (44%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Frame = +1
Query: 472 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 651
LL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LAR
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAR 180
Query: 652 EVLRLRGVLPRDQRW-----DVVVDLFFYRDPEXSEKDEXQAKXQAVVPXKPXXXAPVHE 816
E+L LRG + R + +++ DL+FYRDP +EK+E A A V P
Sbjct: 181 EILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETEKEETGA--HADVAEAQEYQQPTDI 238
Query: 817 XWNEXXXPXXSWAEXTA 867
+ WA TA
Sbjct: 239 DFTTQGGKVDDWAAETA 255
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.052
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.052
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.052
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.052
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 290 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 412
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 287 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSC 454
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSC 92
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 553 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 660
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 525 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 632
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,086,162
Number of Sequences: 27780
Number of extensions: 356280
Number of successful extensions: 858
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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