Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B24
(904 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0) 206 2e-53
SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.) 166 2e-41
SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.059
SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23) 35 0.10
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 34 0.14
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 34 0.18
SB_45885| Best HMM Match : efhand (HMM E-Value=5.9e-05) 33 0.24
SB_53075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_32882| Best HMM Match : tRNA_synt_1c_R2 (HMM E-Value=2.6) 32 0.73
SB_53572| Best HMM Match : efhand (HMM E-Value=0.0053) 32 0.73
SB_17290| Best HMM Match : tRNA_synt_1c_R2 (HMM E-Value=2.6) 32 0.73
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_14606| Best HMM Match : efhand (HMM E-Value=0.00036) 31 1.3
SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) 31 1.7
SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_28972| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51) 29 3.9
SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092) 29 6.8
SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_21444| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_35370| Best HMM Match : Ank (HMM E-Value=4.8e-06) 28 9.0
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 28 9.0
SB_13421| Best HMM Match : Harpin (HMM E-Value=0.62) 28 9.0
>SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0)
Length = 266
Score = 206 bits (503), Expect = 2e-53
Identities = 110/202 (54%), Positives = 134/202 (66%), Gaps = 2/202 (0%)
Frame = +2
Query: 119 MTTLRCVLMLVALAGATFAGPEVT-ELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGH 295
M L +L +VA +G E ELK EVVS PE CT K+ GD L+MHYTG L +G+
Sbjct: 1 MKGLMNLLAIVAFSGLALGAEEPKGELKIEVVSKPEKCTRKTHVGDTLSMHYTGRLANGN 60
Query: 296 KFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPH 475
KFDSS DR + F F +G G VI+GW+QGLLDMC+GEKRKLTIP L YGE GAG IPPH
Sbjct: 61 KFDSSLDRGKTFDFTLGKGMVIQGWEQGLLDMCIGEKRKLTIPPHLAYGENGAGAAIPPH 120
Query: 476 ATLHFEVELINI-GDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIK 652
ATL+ +VEL+ I G NVF ID + D +L++EEV +YLK+Q GG S+D
Sbjct: 121 ATLYMDVELVEIQGSKESDPNVFGMIDKNNDKVLTQEEVKNYLKEQ-----GGMPSDD-- 173
Query: 653 QMLESHDKLVEEIFQHEDKDKN 718
SHD +V EIFQ EDKDK+
Sbjct: 174 --EASHDTIVSEIFQQEDKDKD 193
>SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 166 bits (403), Expect = 2e-41
Identities = 82/195 (42%), Positives = 125/195 (64%), Gaps = 7/195 (3%)
Frame = +2
Query: 191 ELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRD---QPFTFQIGVGQVI 361
+++ E VP C K+K GD + +HYTG + DG FD++ D QPF F IG G VI
Sbjct: 99 KIEVEETFVPSDCENKTKVGDHVVVHYTGWMQDGSLFDTTRDHRKGYQPFEFTIGGGTVI 158
Query: 362 KGWDQGLLDMCVGEKRKLTIPASLGYGERGA----GNVIPPHATLHFEVELINIGDSPPA 529
KG++QG+ MCVG+KRK+ IP +L YG++G+ GN+ + TL + +EL ++ PP
Sbjct: 159 KGFEQGVTGMCVGQKRKIVIPPALAYGKKGSGDVPGNLDLTNTTLTYNLELFDVRKPPPH 218
Query: 530 TNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDK 709
+++F +D + D LSREEVS Y++KQ A+ ++ H+++V+ +F++ED
Sbjct: 219 SDMFSHMDENGDRKLSREEVSAYMRKQ---AEAQFAPTYDQRWQHHHERMVDNVFEYEDH 275
Query: 710 DKNGFISHEEFSGPK 754
D++G ISHEEFSGPK
Sbjct: 276 DEDGHISHEEFSGPK 290
>SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 35.5 bits (78), Expect = 0.059
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 671 DKLVEEIFQHEDKDKNGFISHEEF 742
D++VE +F + D DKNG IS+EEF
Sbjct: 696 DEMVEHVFAYADADKNGEISYEEF 719
>SB_43954| Best HMM Match : efhand (HMM E-Value=4.3e-23)
Length = 308
Score = 34.7 bits (76), Expect = 0.10
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +2
Query: 539 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKN 718
F D +KD L+REE++ +L + P E+SE +LE+ +E+I D+DK+
Sbjct: 155 FDAADTNKDGFLTREEMAIFLHPESSP----EMSE--VHILET----IEDI----DRDKD 200
Query: 719 GFISHEEFSGPKHDE 763
G IS +EF G +E
Sbjct: 201 GLISLKEFLGEYEEE 215
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 536 VFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVE 685
+ +E+D +KD ++ EE++D++K V D+K+ + D V+
Sbjct: 76 LIREVDNNKDGAVTTEELTDWVKGVFKKRSMEGVDNDLKEKDANEDGKVD 125
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2
Query: 248 GDMLTMHYTGTLDD----GHKFDSSYDRDQPFTFQIGVGQVIKG 367
GD + + YTG L + G FDS+ D+ F F+ G G+VIKG
Sbjct: 122 GDAVEVKYTGWLLENGNFGKVFDSNAGTDKTFKFKTGKGKVIKG 165
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Frame = +2
Query: 533 NVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVS-----EDIKQMLESHD---KLV-- 682
+VF E+D D+ +S E+ KK + D + S ED + S + K V
Sbjct: 9 DVFNEVDESADHRISWAELQQCCKKLQIELDNDDQSVFHSCEDQQGEGLSFNGFCKFVTL 68
Query: 683 --EEIFQHEDKDKNGFISHEEFS 745
E+IFQ D+D +G+I H E S
Sbjct: 69 RLEKIFQEIDEDNSGYIDHNEIS 91
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 536 VFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVE 685
+F+EID D + E+S+ LKK + ++ +K M ++D ++
Sbjct: 73 IFQEIDEDNSGYIDHNEISNALKKLDINLPSRQIDGILKGMDLNNDNRID 122
>SB_45885| Best HMM Match : efhand (HMM E-Value=5.9e-05)
Length = 611
Score = 33.5 bits (73), Expect = 0.24
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Frame = +2
Query: 536 VFKEIDADKDNMLSREEVSDYLKKQMVPAD----------GGEVSEDIKQMLESHDKLVE 685
+FK D D+D+ +S++E++ L + A+ G +++ +++E+ K+V+
Sbjct: 185 LFKVFDLDEDDGVSKDELTAVLLSSLESAEKILDNMEEPSSGCTADNTDRLIETVTKIVD 244
Query: 686 EIFQHEDKDKNGFISHEEF 742
E F+ K+G +S +EF
Sbjct: 245 EAFKKSHVSKSGKLSAKEF 263
>SB_53075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 32.3 bits (70), Expect = 0.55
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 14 YXLTIGNSLRFCSCSTGAVGNARFSCKKKLFVSSTMTTLRCVLM--LVALAGATFAGPEV 187
Y L + N FC+C + SCKK FV+ T+R +L + + P +
Sbjct: 166 YNLPLSNLPSFCACGERFTVSHALSCKKGGFVAQRNDTIRDLLTAHISKVCKNVETEPLL 225
Query: 188 TELKTEVVSVPEGCTTKSKHGDM 256
L EV ++ T+K DM
Sbjct: 226 QPLDNEVFNLQSTVTSKEARLDM 248
>SB_32882| Best HMM Match : tRNA_synt_1c_R2 (HMM E-Value=2.6)
Length = 170
Score = 31.9 bits (69), Expect = 0.73
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +2
Query: 512 GDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLES 667
GD P+ N + ++ ++ L+ EE++ + ++++ GG+ SE I++ ES
Sbjct: 43 GDKKPSANFLEFLNTLQETPLTLEELARAVDREILTEAGGQASERIREFDES 94
>SB_53572| Best HMM Match : efhand (HMM E-Value=0.0053)
Length = 263
Score = 31.9 bits (69), Expect = 0.73
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 488 FEVELINIGDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLES 667
+E+EL +S + I D+ + + D K M A E ++ +ML
Sbjct: 157 WELELFRKANSEIGWSCHNCITKDEYVRYKKAQYKDIHKSDMPRAQVEEAQNELVRMLSP 216
Query: 668 HD-KLVEEIFQHEDKDKNGFISHEEFS 745
+ + + +IF DKD++G+I+ E S
Sbjct: 217 REIQSLRDIFHAFDKDEDGYINSYEVS 243
>SB_17290| Best HMM Match : tRNA_synt_1c_R2 (HMM E-Value=2.6)
Length = 231
Score = 31.9 bits (69), Expect = 0.73
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +2
Query: 512 GDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLES 667
GD P+ N + ++ ++ L+ EE++ + ++++ GG+ SE I++ ES
Sbjct: 54 GDKKPSANFLEFLNTLQETPLTLEELARAVDREILTEAGGQASERIREFDES 105
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 644 DIKQMLESHDKLVEEIFQHEDKDKNGFISHEEF 742
D K+ E ++ E + DKDK+GF+S +EF
Sbjct: 992 DPKERDEEISRMREHVMNEIDKDKDGFVSQDEF 1024
>SB_14606| Best HMM Match : efhand (HMM E-Value=0.00036)
Length = 633
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 539 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKN 718
F E+D +KD+++SREE +Y +++ G E+ D + + E IF D+D
Sbjct: 576 FDEVDVNKDSLISREEFINYQQEKYKRLMGREM-PDYRYIQEM------RIFNDMDRDGT 628
Query: 719 GFI 727
G I
Sbjct: 629 GLI 631
>SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)
Length = 776
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 539 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKN 718
F D D + +SR+E+ + + Q + G V + + + + +K E+IF+ DK+ +
Sbjct: 105 FNMYDLDGNGYISRQEMLEIV--QAIYKMVGSVMK-MPEDESTPEKRTEKIFRQMDKNLD 161
Query: 719 GFISHEEF-SGPKHD 760
G +S EEF G K D
Sbjct: 162 GKLSLEEFIEGAKSD 176
>SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 515 DSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIF 694
D+ T+ + D D D+ S +++ D DG + +DI +SHD + +
Sbjct: 62 DTGDGTDSHADDDID-DSTDSHDDIDDGTDDHDDIDDGKDSHDDIDDGTDSHDDIDDGTD 120
Query: 695 QHEDKDKNGFISHEEFSG--PKHDEL 766
H+D D +G SH++ HD++
Sbjct: 121 DHDDID-DGTDSHDDIDDGTDSHDDI 145
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +2
Query: 551 DADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNGFIS 730
D D S +++ D DG + +DI +SHD + + H+D D +G
Sbjct: 285 DDTDDGTDSHDDIDDGTDSHDDIDDGTDSHDDIDDGTDSHDDIDDGTDDHDDTD-DGTDG 343
Query: 731 HEEFSGPKHD 760
H++ +D
Sbjct: 344 HDDIDDDTYD 353
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 557 DKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNGFISHE 736
D D+ +++ D + DG + +DI +SHD + + H+D D +G SH+
Sbjct: 191 DHDDTEDHDDIDDGTESHDDIDDGTDDHDDIDDGTDSHDDIDDGTDDHDDID-DGKDSHD 249
Query: 737 EFSGPKHD 760
+ D
Sbjct: 250 DIDDGTDD 257
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +2
Query: 563 DNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNGFISHEEF 742
D S +++ D DG + +DI +SHD + + H+D D +G SH++
Sbjct: 269 DGTDSHDDIDDDTDNHDDTDDGTDSHDDIDDGTDSHDDIDDGTDSHDDID-DGTDSHDDI 327
Query: 743 SGPKHD 760
D
Sbjct: 328 DDGTDD 333
>SB_28972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +2
Query: 47 CSCSTGAVGNARFSCKKKLFVSSTMTTLRCVLM--LVALAGATFAGPEVTELKTEVVSVP 220
C+C N SCKK +FV+ T+R +L + + P + L EV ++
Sbjct: 3 CACGANFTINHALSCKKGVFVAQRHDTIRNLLTSHISKVCKNVETEPSLQPLDNEVFNLQ 62
Query: 221 EGCTTKSKHGDM 256
T++ DM
Sbjct: 63 STTTSREARLDM 74
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 29.9 bits (64), Expect = 2.9
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +2
Query: 500 LINIGDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKL 679
L +I SP + KE++ ++ + + Y + + +P G + + + E+ +L
Sbjct: 501 LKDITVSPKVFDEIKELEKERGVTIITGGIGGYKRPKEMPP-GMRIL--LNFISENRLRL 557
Query: 680 VEEIFQHEDKDKNGFISHEEFS-GPKHDEL*MSLRSL 787
++ F DKD +G IS EEFS G K L M+ R L
Sbjct: 558 IDW-FNQFDKDHSGGISREEFSKGLKETGLVMTKRQL 593
>SB_15862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 542 KEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNG 721
+++D +KD +S EE Y+ + P + +S + K L+ K E+ ++H D D +
Sbjct: 122 EQMDKNKDGKVSWEE---YVNVEYDPKNEKGMSNENKDHLKEMKKRDEKRWKHADMDNDN 178
Query: 722 FISHEEFSGPKHDE 763
++ +E H E
Sbjct: 179 LLTIDELQMFIHPE 192
>SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 465
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 574 EHVVLIGVDFLEHVCGRWRVTDVDQLHFEMQCSVGRNHVAGSAL 443
E V+ + V +E V R + DV QLH + + S+GR V+ L
Sbjct: 181 ESVIAVRVHLVECVWFRLPILDVQQLHVKYERSLGRELVSNLLL 224
>SB_17534| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.51)
Length = 976
Score = 29.5 bits (63), Expect = 3.9
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +2
Query: 509 IGDSPPATNVFKEIDADKDNMLSREEVSDYLKKQMVPADG-GEVSEDIKQMLESHDKLVE 685
IG+ P N+ + I+A + + S + D + Q+ DG G++ + ++ VE
Sbjct: 250 IGELPEIINLERRIEAAEVGIKSLRNIIDSMVNQVDFGDGVGDMLKAQLDQVQQQMNEVE 309
Query: 686 EIFQHEDKDK---NGFISHEEFSGPK 754
I + E KDK GF S E + P+
Sbjct: 310 LIKKEEPKDKKKNKGFKSKESQNVPQ 335
>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 620 ADGGEVSEDIKQMLESH-DKLVEEIFQHEDKDKNGFISHEEF 742
A GG D ++++E H +VE +F+ D +K+G IS +EF
Sbjct: 263 ASGGTAVPD-RRVVERHVSAMVEAVFRVYDTNKDGTISSKEF 303
>SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092)
Length = 403
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 539 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSE 643
F E+DADKD ++ EE+ + + GG V E
Sbjct: 340 FAEVDADKDGFVTPEEMMSLHSRDLERLLGGTVQE 374
>SB_58660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +2
Query: 575 SREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNGFISHEE 739
SRE+ ++ D ++ + L F DKDK+GFI+H E
Sbjct: 279 SREDAEVLHNREGPEGDRSREDQESVRSPNRRRTLFRHYFTKNDKDKDGFINHRE 333
>SB_21444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 653 QMLESHDKLVEEIFQHEDKDKNGFISHEEF 742
QM H ++++ IF+ D+D G + +EEF
Sbjct: 54 QMNNEHLEVLQRIFEEADEDGGGGLDYEEF 83
>SB_35370| Best HMM Match : Ank (HMM E-Value=4.8e-06)
Length = 813
Score = 28.3 bits (60), Expect = 9.0
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = -1
Query: 613 HLLLQIVAHFFAGEHVVLIGVDFLEHVCGRWRVTDVDQLHFEMQCSVGRNHVAGSALSVA 434
H L H F E + VDF+ C WR+ + Q + G + S L +
Sbjct: 734 HRLFLYGIHGFFDEIMFTATVDFIASGCSDWRLRGHSSMWSLFQYAFGSYLIERSFLFLK 793
Query: 433 QGCGNSQFT 407
Q S+FT
Sbjct: 794 QNTALSRFT 802
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -3
Query: 326 VDRDHNSSRTCVRRLACQCSAW*AYRRAWTSWC 228
V D +S C R C W +AW WC
Sbjct: 956 VSPDASSFEYCARNRRCASQRWKDSAKAWLLWC 988
>SB_13421| Best HMM Match : Harpin (HMM E-Value=0.62)
Length = 375
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 435 PKDAGIVSLRFSPTHMSSKPWSHPLITC 352
PK G S H SS W HP ++C
Sbjct: 257 PKSHGAASPSLMGQHFSSLMWQHPQVSC 284
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,039,502
Number of Sequences: 59808
Number of extensions: 552502
Number of successful extensions: 1496
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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