Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B24
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   1.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.8  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   5.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   5.0  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   6.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   8.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   8.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 665 SHDKLVEEIFQHEDKDKNGFISHEE 739
           S + LV  +F H D++ NG +  EE
Sbjct: 233 SKEYLVSIMFSHYDRNNNGNLEREE 257


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +2

Query: 422 PASLGYGERGAGNVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNM 571
           P +  Y  R   N+  P   L F +EL  + +SP     F + D  K  +
Sbjct: 111 PIATKYLRRYEDNIFLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKL 160


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +2

Query: 422 PASLGYGERGAGNVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNM 571
           P +  Y  R   N+  P   L F +EL  + +SP     F + D  K  +
Sbjct: 126 PIATKYLRRYEDNIFLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKL 175


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 736 GILWT*ARRTLNESPKP*ALLGAXILHKICSTSHKK 843
           G +W    + L+ S  P  LLG  +++    T+H K
Sbjct: 257 GYVWIVTEQALDASNAPEGLLGLKLINAENETAHIK 292


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 216 FQKDAPRSPSTAICSPCTTL 275
           F+K   ++P   +C PCT++
Sbjct: 102 FRKVITKAPLECMCRPCTSV 121


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 21/105 (20%), Positives = 49/105 (46%)
 Frame = +2

Query: 404 KRKLTIPASLGYGERGAGNVIPPHATLHFEVELINIGDSPPATNVFKEIDADKDNMLSRE 583
           +RK+    S  Y +R + +++   +         ++  S P  +  KE    K+N    +
Sbjct: 13  QRKIIRSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQDHNKE--KSKNNHHCNQ 70

Query: 584 EVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKN 718
           + ++ L +  + +D  +   D K+     D+L  ++F+ E+K+K+
Sbjct: 71  D-TEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECENKEKS 114


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 68  VGNARFSCKKKLFVSSTMTTLRC 136
           +GN RF C + LF  S +    C
Sbjct: 25  IGNERFRCPEALFQPSFLGMEAC 47


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 337 PNWRWASDQ 363
           PNW WA +Q
Sbjct: 109 PNWSWAKNQ 117


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 179 PEVTELKTEVVSVPEGCTT 235
           PEVT L +++V   E C+T
Sbjct: 488 PEVTMLFSDIVGFTEICST 506


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,659
Number of Sequences: 438
Number of extensions: 4571
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)