Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B23
         (1277 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ...    36   2.2  
UniRef50_Q0ILB7 Cluster: ORF1629; n=1; Leucania separata nuclear...    35   5.2  
UniRef50_Q5KAA5 Cluster: Cytokinesis protein sepa (Fh1/2 protein...    34   6.9  
UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA...    30   7.0  
UniRef50_UPI0000E48A7F Cluster: PREDICTED: hypothetical protein;...    34   9.1  
UniRef50_Q1HMI7 Cluster: Formin B; n=4; Trypanosoma cruzi|Rep: F...    34   9.1  
UniRef50_A6NDC4 Cluster: Uncharacterized protein ENSP00000362844...    34   9.1  
UniRef50_Q9Y4A5 Cluster: Transformation/transcription domain-ass...    34   9.1  

>UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; n=9;
            Magnoliophyta|Rep: DEAD-box ATP-dependent RNA helicase 7
            - Arabidopsis thaliana (Mouse-ear cress)
          Length = 671

 Score = 35.9 bits (79), Expect = 2.2
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = -3

Query: 1083 QQXFGGWXRGXRDXGXWGXVXGXGGGXGXGGXG 985
            Q+ FGG  RG R  G  G   G GGG G GG G
Sbjct: 633  QKRFGGGGRGNRFGGGGGNRFGGGGGRGRGGSG 665


>UniRef50_Q0ILB7 Cluster: ORF1629; n=1; Leucania separata nuclear
            polyhedrosis virus|Rep: ORF1629 - Leucania separata
            nuclear polyhedrosis virus (LsNPV)
          Length = 589

 Score = 34.7 bits (76), Expect = 5.2
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +2

Query: 911  PXLPXRXRXPTAPXXXAPIXXGXTSPXPPXPXPPPXP 1021
            P  P +   P  P    P+  G   P PP P PPP P
Sbjct: 244  PAPPPQPIPPPPPPPPMPVESGSPPPPPPPPPPPPPP 280


>UniRef50_Q5KAA5 Cluster: Cytokinesis protein sepa (Fh1/2 protein),
            putative; n=1; Filobasidiella neoformans|Rep: Cytokinesis
            protein sepa (Fh1/2 protein), putative - Cryptococcus
            neoformans (Filobasidiella neoformans)
          Length = 1776

 Score = 34.3 bits (75), Expect = 6.9
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +2

Query: 911  PXLPXRXRXPTAPXXXAPIXXGXTSPXPPXPXPPPXP 1021
            P  P     P  P    P   G T+P PP P PPP P
Sbjct: 1090 PPPPPPPPPPPPPPPPPPGAIGLTAPPPPPPPPPPPP 1126


>UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA;
            n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
            similar to CG33556-PA - Strongylocentrotus purpuratus
          Length = 1472

 Score = 30.3 bits (65), Expect(2) = 7.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 938  PTAPXXXAPIXXGXTSPXPPXPXPPP 1015
            P  P    P+  G  +P PP P PPP
Sbjct: 420  PPPPPPPPPLPPGVGAPPPPPPPPPP 445



 Score = 22.6 bits (46), Expect(2) = 7.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 992  PPXPXPPPXP 1021
            PP P PPP P
Sbjct: 466  PPPPPPPPFP 475


>UniRef50_UPI0000E48A7F Cluster: PREDICTED: hypothetical protein; n=2;
            Deuterostomia|Rep: PREDICTED: hypothetical protein -
            Strongylocentrotus purpuratus
          Length = 944

 Score = 33.9 bits (74), Expect = 9.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -3

Query: 1071 GGWXRGXRDXGXWGXVXGXGGGXGXGGXG 985
            GGW RG    G +G   G GGG   GG G
Sbjct: 705  GGWNRGGGGGGGYGGGRGGGGGYNSGGYG 733


>UniRef50_Q1HMI7 Cluster: Formin B; n=4; Trypanosoma cruzi|Rep: Formin
            B - Trypanosoma cruzi strain CL Brener
          Length = 968

 Score = 33.9 bits (74), Expect = 9.1
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +2

Query: 911  PXLPXRXRXPTAPXXXAPIXXGXTSPXPPXPXPPPXP 1021
            P  P     P  P    P   G  +P PP P PPP P
Sbjct: 459  PVSPSSSPPPRTPPPPPPPPPGKNAPPPPPPPPPPPP 495


>UniRef50_A6NDC4 Cluster: Uncharacterized protein ENSP00000362844;
            n=4; Eutheria|Rep: Uncharacterized protein
            ENSP00000362844 - Homo sapiens (Human)
          Length = 306

 Score = 33.9 bits (74), Expect = 9.1
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = +2

Query: 911  PXLPXRXRXPTAPXXXAPIXXGXTSPXPPXPXPPP 1015
            P LP R   P A     P      SP PP P PPP
Sbjct: 136  PPLPARLPAPAAAPPPTPAPPPPPSPAPPQPPPPP 170


>UniRef50_Q9Y4A5 Cluster: Transformation/transcription
            domain-associated protein; n=45; Deuterostomia|Rep:
            Transformation/transcription domain-associated protein -
            Homo sapiens (Human)
          Length = 3859

 Score = 33.9 bits (74), Expect = 9.1
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +2

Query: 938  PTAPXXXAPIXXGXTSPXPPXPXPPPXPXT 1027
            PTAP    P       P PP P PPP P T
Sbjct: 488  PTAPAAPGPAPSPAPVPAPPPPPPPPPPAT 517


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,117,857
Number of Sequences: 1657284
Number of extensions: 5587073
Number of successful extensions: 33585
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26917
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 130389636398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)