Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B23
(1277 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 31 1.9
07_03_0190 + 14893243-14893582,14893684-14893808 31 1.9
07_03_0177 - 14770777-14772045 31 2.6
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 30 3.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 4.5
07_03_0558 + 19461369-19462448 30 4.5
07_03_0154 + 14509979-14512033 30 4.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 4.5
07_01_0080 + 587674-588510 30 4.5
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233... 29 5.9
06_02_0127 + 12140843-12140966,12141170-12141567 29 5.9
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904... 29 7.9
>10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 947 PXXXAPIXXGXTSPXPPXPXPPPXPXT 1027
P P T+P PP P PPP P T
Sbjct: 333 PPPPPPSRFNNTTPKPPPPPPPPEPPT 359
>07_03_0190 + 14893243-14893582,14893684-14893808
Length = 154
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1083 QQXFGGWXRGXRDXGXWGXVXGXGGGXGXGGXG 985
Q GGW D G G G GGG GG G
Sbjct: 14 QYLAGGWPAAGADGGGGGAGGGCGGGGAGGGYG 46
>07_03_0177 - 14770777-14772045
Length = 422
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 1071 GGWXRGXRDXGXWGXVXGXGGGXGXGGXGEVXPXXIGAXXXGAVG 937
GG+ +G G +G G GGG G GG G G +G
Sbjct: 343 GGFGKGGGIGGGFGKGGGLGGGGGLGGGGGGGGGGFGGGGGSGIG 387
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = -3
Query: 1071 GGWXRGXRDXGXWGXVXGXGGGXGXGGXGEVXPXXIGAXXXGAVGXRXR*GXXGE*RRXN 892
GG+ +G G +G G GGG G G G G G +G G G +
Sbjct: 121 GGFGKGGGFGGGFGKGGGIGGGIGHGAGG-------GFGKGGGLGGGIGPGIGGGYGKGG 173
Query: 891 GLGELLXXGXG 859
GLG + G G
Sbjct: 174 GLGGGIGKGGG 184
>05_04_0206 + 19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 30.3 bits (65), Expect = 3.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 926 RXRXPTAPXXXAPIXXGXTSPXPPXPXPPPXP 1021
R R P +P +P PP P PPP P
Sbjct: 196 RHRPQVPPLVSSPAPGTPVTPQPPPPPPPPPP 227
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 911 PXLPXRXRXPTAPXXXAPIXXGXTSPXPPXPXPPP 1015
P LP R P P P+ P PP P PPP
Sbjct: 610 PILPNRS-VPPPPPPPPPLPNHSVLPPPPPPPPPP 643
>07_03_0558 + 19461369-19462448
Length = 359
Score = 29.9 bits (64), Expect = 4.5
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 1071 GGWXRGXRDXGXWGXVXGXGGGXGXGGXGEVXPXXIGAXXXGA-VGXRXR*GXXGE*RRX 895
GG+ G G G G GGG G GG G + G GA VG G G
Sbjct: 153 GGFGAGGGVGGGAGGGVGGGGGFGGGGGGGLGGGHGGGFGGGAGVGGGAGGGVGGGGGFG 212
Query: 894 NGLGELLXXGXG 859
G G L G G
Sbjct: 213 GGGGSGLGGGQG 224
Score = 29.1 bits (62), Expect = 7.9
Identities = 23/71 (32%), Positives = 25/71 (35%)
Frame = -3
Query: 1071 GGWXRGXRDXGXWGXVXGXGGGXGXGGXGEVXPXXIGAXXXGAVGXRXR*GXXGE*RRXN 892
GG+ G G G G GGG G GG G G G +G G G
Sbjct: 44 GGFGEGEGFGGGGGFGGGGGGGLGGGGGGLGGGHGGGFGGGGGLGGGASGGVGGGGGFGG 103
Query: 891 GLGELLXXGXG 859
G G L G G
Sbjct: 104 GGGGGLGGGQG 114
>07_03_0154 + 14509979-14512033
Length = 684
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +2
Query: 905 YSPXLPXRXRXPTAPXXXAPIXXGXTSPXPPXPXPPPXP 1021
+ P L + A P+ +P PP P PPP P
Sbjct: 26 FLPFLKREPKSEPASPERGPLPLPAAAPPPPPPPPPPPP 64
>07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 917 LPXRXRXPTAPXXXAPIXXGXTSPXPPXPXPPPXP 1021
LP P P A I P PP P PPP P
Sbjct: 226 LPPLPPPPPPPPKPANIAGAPGLPLPPPPPPPPGP 260
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 4.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 932 RXPTAPXXXAPIXXGXTSPXPPXPXPPPXP 1021
R P P P P PP P PPP P
Sbjct: 89 RRPPPPPPPPPSSGSPPPPPPPPPPPPPPP 118
>10_08_1008 - 22222051-22222377,22222479-22222640,22223179-22223310,
22224556-22224608,22224713-22225256
Length = 405
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 938 PTAPXXXAPIXXGXTSPXPPXPXPPPXP 1021
P AP AP +P P P PPP P
Sbjct: 13 PPAPAAAAPPPAAAPAPPPSQPPPPPLP 40
>06_02_0127 + 12140843-12140966,12141170-12141567
Length = 173
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 1074 FGGWXRGXRDXGXWGXVXGXGGGXGXGG 991
+GG+ +G G G G GGG G GG
Sbjct: 130 YGGYNKGYGGGGGGGYSKGFGGGYGGGG 157
>03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,
9041608-9041802,9041905-9042153,9042525-9042672,
9042673-9042779,9043311-9043475,9044506-9045948
Length = 1273
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 1074 FGGWXRGXRDXGXWGXVXGXGGGXGXGGXG 985
FGG G G G G GGG G GG G
Sbjct: 91 FGGGAGGPLGGGGGGWGAGGGGGGGGGGGG 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,867,185
Number of Sequences: 37544
Number of extensions: 205522
Number of successful extensions: 2308
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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