Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B19
         (1246 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000065CD6A Cluster: Homolog of Homo sapiens "Splice ...    35   3.8  
UniRef50_UPI0000DB6CCB Cluster: PREDICTED: hypothetical protein;...    34   6.6  
UniRef50_Q5CHL3 Cluster: Hydroxyproline-rich glycoprotein dz-hrg...    34   6.6  
UniRef50_A7QNX2 Cluster: Chromosome chr1 scaffold_135, whole gen...    34   8.8  

>UniRef50_UPI000065CD6A Cluster: Homolog of Homo sapiens "Splice
            Isoform 1 of Anthrax toxin receptor 1 precursor; n=2;
            Clupeocephala|Rep: Homolog of Homo sapiens "Splice
            Isoform 1 of Anthrax toxin receptor 1 precursor -
            Takifugu rubripes
          Length = 503

 Score = 35.1 bits (77), Expect = 3.8
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +1

Query: 1084 APXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            +P TQ S P     SS +    PP   PP    PPP  PPP
Sbjct: 459  SPTTQISPPARPPPSSQLPPGPPPARTPPGLLCPPPSRPPP 499


>UniRef50_UPI0000DB6CCB Cluster: PREDICTED: hypothetical protein; n=1;
            Apis mellifera|Rep: PREDICTED: hypothetical protein -
            Apis mellifera
          Length = 394

 Score = 34.3 bits (75), Expect = 6.6
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 1093 TQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            T T+LP         + + PP   PP    PPP  PPP
Sbjct: 215  TSTTLPTAVVVPPPQVQVVPPPPPPPPPPPPPPPPPPP 252


>UniRef50_Q5CHL3 Cluster: Hydroxyproline-rich glycoprotein dz-hrgp;
            n=8; Cryptosporidium|Rep: Hydroxyproline-rich
            glycoprotein dz-hrgp - Cryptosporidium hominis
          Length = 328

 Score = 34.3 bits (75), Expect = 6.6
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +1

Query: 1087 PXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            P T  SLP     S+      PP   PP    PPP  PPP
Sbjct: 209  PPTPPSLPLSQTPSNDDFPPPPPPPPPPPPPSPPPQSPPP 248


>UniRef50_A7QNX2 Cluster: Chromosome chr1 scaffold_135, whole genome
            shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome chr1
            scaffold_135, whole genome shotgun sequence - Vitis
            vinifera (Grape)
          Length = 673

 Score = 33.9 bits (74), Expect = 8.8
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = +1

Query: 1075 TSHAPXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            +S  P + TS P      S     SPP T PP    PPP  PPP
Sbjct: 56   SSPPPDSNTSPPSPPPPKSE----SPPPTPPPPSPSPPPPPPPP 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,800,556
Number of Sequences: 1657284
Number of extensions: 3481629
Number of successful extensions: 38834
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31132
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 125935332049
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)