Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B19
         (1246 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         32   1.1  
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954...    31   2.5  
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527...    31   2.5  
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090...    30   4.4  
06_01_0486 - 3455030-3455770                                           29   7.6  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 1144 ISPPXTXPPXKRXPPPXXPPP 1206
            + PP   PP K  PPP  PPP
Sbjct: 135  VEPPHRPPPVKPQPPPSLPPP 155


>07_03_1090 + 23891294-23892222,23892317-23892516,23895241-23895482,
            23895771-23896461,23896486-23896562
          Length = 712

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
            +PP T PP    PPP  PPP
Sbjct: 212  APPQTNPPRPVRPPPPPPPP 231


>02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,
            5271153-5271263,5271363-5271434,5271533-5271604,
            5272126-5272197,5272281-5272346,5272426-5272491,
            5272601-5272971,5273203-5273456,5273886-5274157,
            5274333-5274474,5275174-5275313,5275381-5275537,
            5275797-5275965,5276048-5276088
          Length = 772

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
            SPP   PP    PPP  PPP
Sbjct: 281  SPPTPHPPPSSPPPPMSPPP 300


>09_06_0107 + 20907560-20908491,20908511-20908625,20908967-20909058,
            20909293-20909556,20910714-20911494
          Length = 727

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = +2

Query: 1085 PHXHRHLXXXXPXXPXX*XRSPPPXXPRPXKEXPP 1189
            PH H H+    P  P     SPPP  P P    PP
Sbjct: 63   PHPHHHVSAAPP--PPQTPPSPPPPPPPPPPPPPP 95


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
            +PP   PP    PPP  PPP
Sbjct: 120  TPPYVPPPTPPSPPPYVPPP 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,180,446
Number of Sequences: 37544
Number of extensions: 157335
Number of successful extensions: 2621
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2208
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3841085160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)