Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B19
         (1246 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK025429-1|BAB15128.1|  274|Homo sapiens protein ( Homo sapiens ...    33   1.6  
AF279145-1|AAK52094.1|  564|Homo sapiens tumor endothelial marke...    33   1.6  
AC112230-1|AAX88860.1|  329|Homo sapiens unknown protein.              33   1.6  
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain...    31   8.7  
AK097947-1|BAC05201.1|  209|Homo sapiens protein ( Homo sapiens ...    31   8.7  
AB075851-1|BAB85557.1|  830|Homo sapiens KIAA1971 protein protein.     31   8.7  

>AK025429-1|BAB15128.1|  274|Homo sapiens protein ( Homo sapiens cDNA:
            FLJ21776 fis, clone HEP00171. ).
          Length = 274

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 16/42 (38%), Positives = 17/42 (40%)
 Frame = +1

Query: 1081 HAPXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            H P    S P     S     + PP   PP  R PPP  PPP
Sbjct: 230  HCPPPPPSAPTPPIPSPPST-LPPPPQAPPPNRAPPPSRPPP 270


>AF279145-1|AAK52094.1|  564|Homo sapiens tumor endothelial marker 8
            precursor protein.
          Length = 564

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 16/42 (38%), Positives = 17/42 (40%)
 Frame = +1

Query: 1081 HAPXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            H P    S P     S     + PP   PP  R PPP  PPP
Sbjct: 520  HCPPPPPSAPTPPIPSPPST-LPPPPQAPPPNRAPPPSRPPP 560


>AC112230-1|AAX88860.1|  329|Homo sapiens unknown protein.
          Length = 329

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 16/42 (38%), Positives = 17/42 (40%)
 Frame = +1

Query: 1081 HAPXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            H P    S P     S     + PP   PP  R PPP  PPP
Sbjct: 285  HCPPPPPSAPTPPIPSPPST-LPPPPQAPPPNRAPPPSRPPP 325


>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
            protein protein.
          Length = 3567

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
            +PP T PP    PPP  PPP
Sbjct: 1992 APPPTPPPPPPPPPPPPPPP 2011


>AK097947-1|BAC05201.1|  209|Homo sapiens protein ( Homo sapiens cDNA
            FLJ40628 fis, clone THYMU2014204, weakly similar to
            WISKOTT-ALDRICH SYNDROME PROTEIN. ).
          Length = 209

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 1126 SSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            SS  + + PP   PP    PPP  PPP
Sbjct: 58   SSEELSLPPPPPPPPPPPPPPPPPPPP 84


>AB075851-1|BAB85557.1|  830|Homo sapiens KIAA1971 protein protein.
          Length = 830

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 1126 SSXVIXISPPXTXPPXKRXPPPXXPPP 1206
            SS  + + PP   PP    PPP  PPP
Sbjct: 653  SSEELSLPPPPPPPPPPPPPPPPPPPP 679


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,643,936
Number of Sequences: 237096
Number of extensions: 687216
Number of successful extensions: 7851
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6509
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17724886060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)