Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B19
(1246 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 33 0.013
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 31 1.2
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 31 1.6
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 2.1
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 30 3.6
At5g59270.1 68418.m07427 lectin protein kinase family protein co... 30 3.6
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 30 3.6
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 30 3.6
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 30 3.6
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 30 3.6
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 6.3
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 6.3
At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family... 29 6.3
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 8.4
At1g23540.1 68414.m02960 protein kinase family protein contains ... 29 8.4
>At1g31810.1 68414.m03904 formin homology 2 domain-containing protein
/ FH2 domain-containing protein low similarity to
SP|P48608 Diaphanous protein {Drosophila melanogaster};
contains Pfam profile PF02181: Formin Homology 2(FH2)
Domain
Length = 1201
Score = 33.1 bits (72), Expect(2) = 0.013
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +1
Query: 1075 TSHAPXTQTSLPXXXXXSSXVIX-ISPPXTXPPXKRXPPPXXPPP 1206
T H P +T P I PP PP R PPP PPP
Sbjct: 563 TLHQPINKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPP 607
Score = 23.8 bits (49), Expect(2) = 0.013
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 1183 PPPXXPPPX*XRLXTXKXXP 1242
PPP PPP R+ K P
Sbjct: 639 PPPPPPPPPPTRIPAAKCAP 658
>At1g49750.1 68414.m05579 leucine-rich repeat family protein contains
leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 31.5 bits (68), Expect = 1.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
SPP + PP + PPP PPP
Sbjct: 84 SPPPSPPPPQLPPPPQLPPP 103
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 1150 PPXTXPPXKRXPPPXXPPP 1206
PP T PP PPP PPP
Sbjct: 67 PPPTSPPPPSPPPPSPPPP 85
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
SPP PP PPP PPP
Sbjct: 71 SPPPPSPPPPSPPPPSPPPP 90
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
SPP PP PPP PPP
Sbjct: 76 SPPPPSPPPPSPPPPSPPPP 95
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 1087 PXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
P T TS P PP PP PPP PPP
Sbjct: 420 PPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPP 459
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
SPP PP PPP PPP
Sbjct: 486 SPPPPPPPVYSPPPPPPPPP 505
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 1150 PPXTXPPXKRXPPPXXPPP 1206
PP + PP PPP PPP
Sbjct: 565 PPHSSPPPHSPPPPHSPPP 583
>At5g67470.1 68418.m08507 formin homology 2 domain-containing protein
/ FH2 domain-containing protein contains formin homology
2 domain, Pfam:PF02181
Length = 899
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 1144 ISPPXTXPPXKRXPPPXXPPP 1206
+ PP PP + PPP PPP
Sbjct: 366 VPPPRRSPPPLQTPPPPPPPP 386
>At5g59270.1 68418.m07427 lectin protein kinase family protein
contains Pfam domains PF00139: Legume lectins beta domain
and PF00069: Protein kinase domain
Length = 668
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 1144 ISPPXTXPPXKRXPPPXXPPP 1206
+ PP PP PPP PPP
Sbjct: 260 LDPPNRPPPPSSPPPPPPPPP 280
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 1087 PXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
P LP + PP PP + PPP PPP
Sbjct: 1080 PPPSPPLPPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPP 1119
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 1087 PXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
P +SLP + PP PP PPP PPP
Sbjct: 1085 PLPPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSPPPP 1124
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains leucine-rich
repeats, Pfam:PF00560; contains proline rich extensin
domains, INTERPRO:IPR002965
Length = 470
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
SPP PP PPP PPP
Sbjct: 375 SPPSPPPPPPPPPPPPPPPP 394
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
SPP PP PPP PPP
Sbjct: 378 SPPPPPPPPPPPPPPPPPPP 397
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 1087 PXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
P T +S P SS PP PP PPP PPP
Sbjct: 62 PPTVSSPPPPPLDSSPP---PPPDLTPPPSSPPPPDAPPP 98
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
SPP PP PPP PPP
Sbjct: 41 SPPPPPPPPPPPPPPPPPPP 60
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical to
gi|10880495|gb|AAG24277
Length = 176
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 1087 PXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
P ++ P V PP PP PPP PPP
Sbjct: 45 PPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPP 84
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical to
gi|10880495|gb|AAG24277
Length = 191
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 1087 PXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPPPXXPPP 1206
P ++ P V PP PP PPP PPP
Sbjct: 45 PPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPP 84
>At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains, INTERPRO:IPR000694
Length = 144
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 1147 SPPXTXPPXKRXPPPXXPPP 1206
+PP PP PPP PPP
Sbjct: 58 NPPPPSPPPPSPPPPACPPP 77
Score = 28.7 bits (61), Expect = 8.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 1150 PPXTXPPXKRXPPPXXPPP 1206
PP + PP PPP PPP
Sbjct: 65 PPPSPPPPACPPPPALPPP 83
>At3g24550.1 68416.m03083 protein kinase family protein contains Pfam
domain PF00069: Protein kinase domain
Length = 652
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 1135 VIXISPPXTXPPXKRXPPPXXPPP 1206
V+ PP P R PPP PPP
Sbjct: 212 VVTSLPPPKPPSPPRKPPPPPPPP 235
>At1g23540.1 68414.m02960 protein kinase family protein contains Pfam
domain, PF00069: Protein kinase domain
Length = 720
Score = 28.7 bits (61), Expect = 8.4
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 1078 SHAPXTQTSLPXXXXXSSXVIXISPPXTXPPXKRXPP-PXXPPP 1206
S P +S P SS +S P T PP + PP P PP
Sbjct: 30 SALPPVDSSPPSPPADSSSTPPLSEPSTPPPDSQLPPLPSILPP 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,287,165
Number of Sequences: 28952
Number of extensions: 95358
Number of successful extensions: 1766
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 12,070,560
effective HSP length: 83
effective length of database: 9,667,544
effective search space used: 3199957064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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