Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B18
         (801 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.1  
04_03_0799 - 19805190-19805749,19806316-19806403                       29   3.3  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    29   5.7  
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544...    29   5.7  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    28   9.9  
07_01_0439 + 3333654-3334217                                           28   9.9  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +1

Query: 661 PPPKXXKKKKXXXXXXXXXPPPXXKXXPXPPPP 759
           PPP   K            PPP  K  P PPPP
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359



 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +1

Query: 661 PPPKXXKKKKXXXXXXXXXPPPXXKXXPXPPPP 759
           PPPK               PPP     P PPPP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPP 349



 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +1

Query: 661 PPPKXXKKKKXXXXXXXXXPPPXXKXXPXPPPP 759
           PPP    K           PPP     P PPPP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPP 358


>04_03_0799 - 19805190-19805749,19806316-19806403
          Length = 215

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +2

Query: 662 PPPKXXKKKKXXXXXXXXXXP-PXXXXXPPPPP 757
           PPPK  +KKK          P P     PPPPP
Sbjct: 80  PPPKEPEKKKKDEKPVCKLVPFPVPYPAPPPPP 112


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +1

Query: 655 GXPPPKXXKKKKXXXXXXXXXPPPXXKXXPXPPPP 759
           G PPP                PPP     P PPPP
Sbjct: 218 GAPPPPPPPPPSPHRHPAAHPPPPPHHPAPRPPPP 252


>04_04_0137 -
           23053148-23053798,23053911-23054146,23054268-23054458,
           23054587-23056010
          Length = 833

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +2

Query: 662 PPPKXXKKKKXXXXXXXXXXPPXXXXXPPPPPP 760
           PPP    +++          PP     PPPPPP
Sbjct: 375 PPPPAVTQQQDVKTSCGPAVPPPPPPTPPPPPP 407


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/33 (33%), Positives = 12/33 (36%)
 Frame = +2

Query: 662 PPPKXXKKKKXXXXXXXXXXPPXXXXXPPPPPP 760
           PPP      +          PP     PPPPPP
Sbjct: 96  PPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPP 128


>07_01_0439 + 3333654-3334217
          Length = 187

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = +2

Query: 662 PPPKXXKKKKXXXXXXXXXXPPXXXXXPPPPPP 760
           PPP    K++           P     PPPPPP
Sbjct: 9   PPPSSKGKRRPGGIIRGPRPQPLIVSPPPPPPP 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,063,791
Number of Sequences: 37544
Number of extensions: 229482
Number of successful extensions: 4547
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3495
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)