Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B17
         (900 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...   128   1e-28
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    95   3e-18
UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Re...    64   5e-09
UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4; Obtectomera...    49   1e-04
UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    49   2e-04
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    47   8e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru...    45   0.002
UniRef50_Q5W8G6 Cluster: Cecropin; n=1; Acalolepta luxuriosa|Rep...    42   0.016
UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep: Cecro...    42   0.021
UniRef50_Q8MUF4 Cluster: Cecropin-B precursor; n=18; Culicidae|R...    42   0.028
UniRef50_UPI0001509DE9 Cluster: hypothetical protein TTHERM_0027...    36   1.1  
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob...    36   1.9  
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    33   7.5  

>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
           Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
           (Silk moth)
          Length = 63

 Score =  128 bits (310), Expect = 1e-28
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +2

Query: 134 MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKA 313
           MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKA
Sbjct: 1   MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKA 60

Query: 314 IGK 322
           IGK
Sbjct: 61  IGK 63


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Rep:
           Cecropin-A precursor - Hyalophora cecropia (Cecropia
           moth)
          Length = 64

 Score = 94.7 bits (225), Expect = 3e-18
 Identities = 41/63 (65%), Positives = 53/63 (84%)
 Frame = +2

Query: 134 MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKA 313
           MNF++I  FVFA + AL+M +AAPEP+WK+FKKIEK+G+NIRDGI+KAGPA+ V+G A  
Sbjct: 1   MNFSRIFFFVFACLTALAMVNAAPEPKWKLFKKIEKVGQNIRDGIIKAGPAVAVVGQATQ 60

Query: 314 IGK 322
           I K
Sbjct: 61  IAK 63


>UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Rep:
           Cecropin A - Plutella xylostella (Diamondback moth)
          Length = 66

 Score = 64.1 bits (149), Expect = 5e-09
 Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +2

Query: 134 MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVK-AGPAIEVLGSAK 310
           M  + I  FVF    A++  SAAP  RWK FKK+EK+GRNIR+GI++  GPA+ V+G A 
Sbjct: 1   MKLSNIFFFVFMAFFAVASVSAAP--RWKPFKKLEKVGRNIRNGIIRYNGPAVAVIGQAT 58

Query: 311 AIGK 322
           +I +
Sbjct: 59  SIAR 62


>UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4;
           Obtectomera|Rep: Antibacterial peptide - Bombyx mori
           (Silk moth)
          Length = 66

 Score = 49.2 bits (112), Expect = 1e-04
 Identities = 25/61 (40%), Positives = 37/61 (60%)
 Frame = +2

Query: 134 MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKA 313
           M F KI   VF  ++ + + S A    W  FK++E +G+ +RD I+ AGPAI+VL  AK 
Sbjct: 1   MYFTKI---VFVAIICIMIVSCASA--WDFFKELEGVGQRVRDSIISAGPAIDVLQKAKG 55

Query: 314 I 316
           +
Sbjct: 56  L 56


>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
           n=5; Ditrysia|Rep: Antibacterial peptide enbocin
           precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 23/61 (37%), Positives = 39/61 (63%)
 Frame = +2

Query: 134 MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKA 313
           MNF +I+ F+F +V A    +A+ +P W IFK+IE+     RD ++ AGPA+  + +A +
Sbjct: 1   MNFTRIIFFLFVVVFA----TASGKP-WNIFKEIERAVARTRDAVISAGPAVRTVAAATS 55

Query: 314 I 316
           +
Sbjct: 56  V 56


>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 46.8 bits (106), Expect = 8e-04
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = +1

Query: 790 SALMNRXXRGERRFAYWALFRFPPH 864
           +ALMNR  RGERRFAYWALFRF  H
Sbjct: 25  AALMNRPTRGERRFAYWALFRFLAH 49


>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
           Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
           (SV40)
          Length = 364

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +2

Query: 596 DPDMIRYIDEFGQTTTRMQ 652
           DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364


>UniRef50_Q5W8G6 Cluster: Cecropin; n=1; Acalolepta luxuriosa|Rep:
           Cecropin - Acalolepta luxuriosa (Udo longicorn beetle)
          Length = 60

 Score = 42.3 bits (95), Expect = 0.016
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
 Frame = +2

Query: 158 FVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGP-AIEVLGSAKAIGK 322
           FVFAL + L++T  A    +  FK+IEK+G+NIR+   ++ P  +   G AK IGK
Sbjct: 7   FVFALAVLLALTGQAESKNF--FKRIEKVGKNIRNAAERSLPTVVGYAGVAKQIGK 60


>UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep:
           Cecropin-D - Antheraea pernyi (Chinese oak silk moth)
          Length = 36

 Score = 41.9 bits (94), Expect = 0.021
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +2

Query: 215 WKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKAIGK 322
           W  FK++E+ G+ +RD I+ AGPA+  +  A A+ K
Sbjct: 1   WNPFKELERAGQRVRDAIISAGPAVATVAQATALAK 36


>UniRef50_Q8MUF4 Cluster: Cecropin-B precursor; n=18; Culicidae|Rep:
           Cecropin-B precursor - Anopheles gambiae (African
           malaria mosquito)
          Length = 60

 Score = 41.5 bits (93), Expect = 0.028
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +2

Query: 134 MNFAKILSFV-FALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAK 310
           MNF K+   V  A+++ + +      PRWK  K++EK+GRN+     KA P   V+   K
Sbjct: 1   MNFTKLFILVAIAVLVVVGVQPVDGAPRWKFGKRLEKLGRNVFRAAKKALP---VIAGYK 57

Query: 311 AIG 319
           A+G
Sbjct: 58  ALG 60


>UniRef50_UPI0001509DE9 Cluster: hypothetical protein
           TTHERM_00278640; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00278640 - Tetrahymena
           thermophila SB210
          Length = 613

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = -2

Query: 554 FFFFLN*VQNILFTYFQFYNITFITKKTLADINFKLYLKLNIIME 420
           FF+FL  +QN++F YF+FY+I F+   T      KL ++L II++
Sbjct: 509 FFYFL--IQNVIF-YFKFYSIYFLVIYTYLYQKVKLNIQLKIIIQ 550


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +3

Query: 816 RGEAVCVLGALPFPASLTXXARSFGCG 896
           R   +C  G +P P SLT  ARSFGCG
Sbjct: 26  RVSRICDTGDIPLPRSLTRYARSFGCG 52


>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
           Enterobacteriaceae|Rep: Lactose operon repressor -
           Escherichia coli (strain K12)
          Length = 360

 Score = 35.5 bits (78), Expect = 1.9
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 844 APNTQTASPRAXXDSLMQ 791
           APNTQTASPRA  DSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 18/34 (52%), Positives = 19/34 (55%)
 Frame = +3

Query: 795 INESXXARGEAVCVLGALPFPASLTXXARSFGCG 896
           I +   AR EAV VL ALP   S T   RS GCG
Sbjct: 267 IRDPATARSEAVWVLVALPLLRSRTRCVRSVGCG 300


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,502,343
Number of Sequences: 1657284
Number of extensions: 13995541
Number of successful extensions: 30280
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30226
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)