BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B16
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 58 1e-08
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 47 2e-05
11_01_0767 + 6438648-6438809,6439146-6440000 47 2e-05
11_02_0011 - 7337618-7338496,7338596-7338991 44 2e-04
11_01_0750 - 6315126-6315896,6316371-6316784 43 4e-04
01_01_1152 + 9170628-9171899 43 4e-04
11_02_0012 - 7346282-7347136,7347234-7347593 41 0.001
05_06_0044 - 25150322-25151260 40 0.004
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 34 0.18
03_05_0294 + 22855503-22855946,22856346-22856399 34 0.18
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 31 1.7
09_04_0426 - 17451731-17451886,17451974-17452079,17452289-174523... 30 2.2
06_01_0485 - 3444240-3444398,3444507-3444572,3444644-3444724,344... 29 3.9
06_01_0059 - 510856-511499,511595-511805 29 3.9
02_05_1133 + 34346894-34347121,34347222-34347283,34347373-343474... 29 3.9
11_06_0305 + 22209640-22209736,22212679-22212941,22213444-222135... 29 5.1
11_01_0771 + 6453130-6454488 29 5.1
09_02_0226 - 6007656-6008063,6012166-6012678 29 5.1
11_02_0014 - 7352619-7352918,7353173-7353418 29 6.7
02_02_0219 + 7985152-7985575,7985818-7985894,7986067-7986127,798... 28 8.9
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 58.0 bits (134), Expect = 1e-08
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Frame = +1
Query: 217 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESSHTYGLLNQRYAEFDP 390
DKN+ SPL + L+L +GA ++ ++I LG GG A + ++ L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 391 ------KFLTVANKIYVSDQYKLADAFSRT-ANLFRSEVDNINFSAP-KNAADIINRWAD 546
+ AN ++V +L A++R A+ +R+E ++F + A IN W +
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 547 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 642
T G IK + +D +D AT + N ++F+G
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKG 182
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYKEPG-- 811
+G W F+A T + F++ + + P M + + G K++ LPY G
Sbjct: 181 KGDWESKFDARSTSDDVFYLPDGGHVSAPFMSSGKWQYIACRA--GYKVLRLPYARGGRG 238
Query: 812 --------FRMVVVLPDXIDGLPAXLEK 871
F M + LPD GLP L K
Sbjct: 239 RGRDTGRLFSMYIYLPDERHGLPDMLRK 266
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYKEPG-- 811
+G W F+AS+T++ +FH+ + +++ P M + + + L K+++LPY++ G
Sbjct: 253 KGAWTEKFDASKTKDGEFHLLDGKSVQAPFMSTSKKQYILSYDNL--KVLKLPYQQGGDK 310
Query: 812 --FRMVVVLPDXIDGLPAXLEK 871
F M ++LP+ DGL + EK
Sbjct: 311 RQFSMYILLPEAQDGLWSLAEK 332
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYKEPG-- 811
+G W F+ S+TE+ +FH+ + +++ P M + + + + L K+++LPY + G
Sbjct: 505 KGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTRKKQYLSSYDSL--KVLKLPYLQGGDK 562
Query: 812 --FRMVVVLPDXIDGLPAXLEK 871
F M ++LP+ DGL + EK
Sbjct: 563 RQFSMYILLPEAQDGLWSLAEK 584
Score = 37.9 bits (84), Expect = 0.011
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Frame = +1
Query: 220 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYG------LLNQRYAE 381
+NV SPL + + LSL +GAG +++++ LGG + E H + +L
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 382 FDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSA-----PKNAADI 528
P+ + A+ ++V L F A +++E +++F P N A+I
Sbjct: 95 GGPR-VAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDFQTKWLLLPSNLANI 148
Score = 32.7 bits (71), Expect = 0.41
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 520 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGA 645
A +N W ++ T G IK + +D T + + N ++F+GA
Sbjct: 214 ASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGA 255
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 529 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGALA 651
+N W D T G IK + I+ T + + N ++F+GA A
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWA 509
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYKE---- 805
+G W PF+ S+T E++F + ++++ P M+ ++ G +++ LPYK
Sbjct: 98 KGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYKATSDT 157
Query: 806 ---------PGFRMVVVLPDXIDGLPAXLEK 871
P F M+V LPD DGLP L++
Sbjct: 158 YNLKLRYSLPSFAMLVFLPDDRDGLPGLLDR 188
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 44.0 bits (99), Expect = 2e-04
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Frame = +1
Query: 208 LADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTY------GLLNQ 369
++ +KN++ SP + L+L +GA + +E+ +LG + + GL ++
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 370 RYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFSA-PKNAADIINRWA 543
A P+ ++ A ++ + +L A+ + A +++ NF PK + IN+W
Sbjct: 87 S-ASGGPR-VSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 544 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 642
+ T I + + + TA+ + N I+F+G
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKG 177
Score = 28.7 bits (61), Expect(2) = 0.054
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 809 GFRMVVVLPDXIDGLPAXLEKXA 877
G M + LPD DGLPA ++K A
Sbjct: 261 GLSMYIFLPDERDGLPALVDKMA 283
Score = 25.8 bits (54), Expect(2) = 0.054
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPY 799
+G W PF S T FH + +++ P M + + ++ G +++LPY
Sbjct: 176 KGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHD--GFTVLKLPY 227
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 42.7 bits (96), Expect = 4e-04
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Frame = +1
Query: 223 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG------GGEAQE----SSHTYGLLNQR 372
N S V + L+L GA ++ ++ + LG GG A S +L R
Sbjct: 33 NAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDR 92
Query: 373 YAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADIINRWAD 546
P+ L A ++ L+ F A N++ S +F + P++A D IN W
Sbjct: 93 STSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVK 151
Query: 547 EQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 642
+ T+G + T + ID T + + + ++F+G
Sbjct: 152 DSTKGTVTTLLPAGTIDQNTGLVLGSALYFRG 183
Score = 36.3 bits (80), Expect = 0.034
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYK----E 805
RG W + T E+ F+ + T+++ P + ++ + ++ K+I+LPYK E
Sbjct: 182 RGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYDRTRLFAVHDNF--KVIKLPYKQGKNE 239
Query: 806 PGFRMVVVLPDXIDGL 853
F M + LPD DGL
Sbjct: 240 RKFSMYIFLPDDHDGL 255
>01_01_1152 + 9170628-9171899
Length = 423
Score = 42.7 bits (96), Expect = 4e-04
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Frame = +1
Query: 220 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGG---GEAQESSHTYGLLNQRYAEFDP 390
+N I SPL L+L GA +++ E+ LG E S T + R+ P
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHL---P 115
Query: 391 KFLTVANKIYVSDQYKLADAFS-RTANLFRSEVDNINFSA-PKNAADIINRWADEQTQGH 564
+ A ++V L F+ A+ + + + +F+ P+ A + +N + + T+G
Sbjct: 116 N-TSFACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGL 174
Query: 565 IKTPVSEDKIDPATAVAMFNVIFFQG 642
I+ + + +D +T V + N + F+G
Sbjct: 175 IRDVLPPNSVDSSTVVVLANAVHFKG 200
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYKEPG 811
+G W +PF+ S T FH+ + ++ P M G ++LPYK G
Sbjct: 199 KGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPYKNVG 256
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 41.1 bits (92), Expect = 0.001
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Frame = +1
Query: 190 LKESYNLADD-----KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTY 354
L+ + LADD +NV+ SP+ + L+L SGA + +E+ +LG + +
Sbjct: 16 LRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESV 75
Query: 355 ------GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINFSAPKN 516
GL ++ +E ++ A ++ ++ L A+ R A+ R PK+
Sbjct: 76 RRAVEVGLADE--SESGGPRVSYACGVWHDERLALKPAY-RAADFQRQ---------PKS 123
Query: 517 AADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 642
+ IN+W + T I+ + + + TA+ + N I+F+G
Sbjct: 124 SRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKG 165
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 656 PFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYKEPGFRMVVVLP 835
PF +S ++ D +K P R +++ + + ++ +++ + G M + LP
Sbjct: 192 PFMSSREDQYIGFYDGFKVLKLPYHRTMKN--HGDGGDITPAILKHYGENVGLSMYIFLP 249
Query: 836 DXIDGLPAXLEKXA 877
D DGLPA ++K A
Sbjct: 250 DARDGLPALVDKMA 263
>05_06_0044 - 25150322-25151260
Length = 312
Score = 39.5 bits (88), Expect = 0.004
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Frame = +2
Query: 644 HWHVPFNASETEEKDFHVDEKTTIKKPTMR-LLQSLFYTENEELGAKMIELPYKEPG--- 811
+W PF TEE DFHV ++ P M Q F G ++ + Y+ G
Sbjct: 89 YWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMYRTGGAAG 148
Query: 812 ----FRMVVVLPDXIDGLPAXLEKXA 877
F M + LPD DGLP K A
Sbjct: 149 GDKMFAMYIYLPDDRDGLPELARKLA 174
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 520 ADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGA 645
A +N W D T G IK + +D T + + N ++F+GA
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGA 47
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 33.9 bits (74), Expect = 0.18
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Frame = +1
Query: 211 ADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG--GGEAQESSHTYG--LLNQRYA 378
A NV SPL + + LSL +GAG +++++ +LG G E H + ++ A
Sbjct: 41 AGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLA 100
Query: 379 EFDP---KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF 501
+ P + A+ +++ L +F A +++E +++F
Sbjct: 101 DSSPAGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF 145
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 340 TLEPPLPQGFPLSLPWTVHRLQTRTRKAAAS 248
+L PPLP G PLS P+ QT + A S
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEKAAPLS 781
>09_04_0426 -
17451731-17451886,17451974-17452079,17452289-17452387,
17452782-17452888,17452985-17453230,17454187-17454461,
17454834-17454886,17455163-17455455
Length = 444
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 109 RRRSTCSVMNSQGQDSAMPSTRPPXKILKESYNLADDKNVIAS 237
RR ST +V S G + P R + LKE Y+++D N+ A+
Sbjct: 37 RRSSTVTVSGSNGYSAHEPGARVSSR-LKEEYSVSDQSNLKAA 78
>06_01_0485 -
3444240-3444398,3444507-3444572,3444644-3444724,
3444823-3444900,3444980-3445075,3445363-3445405,
3445498-3445571,3445693-3445781,3445887-3445935,
3446171-3446227,3446309-3446425,3448633-3448698,
3449140-3449196,3449271-3449363,3449515-3449662,
3449753-3449902,3449979-3450181,3450319-3450438,
3450530-3450694,3450784-3450870,3450951-3451100,
3451225-3451365,3451399-3451569,3452015-3452091,
3452175-3452415,3452495-3452758,3452913-3453000,
3453099-3453481
Length = 1170
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +3
Query: 771 WVPR*SSYRTRSQDSVWSWFCPTKLTDYLXCWKXRPKXVYLK 896
WVP R ++ WS FCP + CW + +Y K
Sbjct: 364 WVPDLFMQRVQNNQE-WSLFCPNEAPGLADCWGDEFEKLYTK 404
>06_01_0059 - 510856-511499,511595-511805
Length = 284
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 250 MLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEFD-PKFLTVANKIYVS 426
+LL + GAG S ++ GGG +++H +G+ Q +A D LTV Y +
Sbjct: 197 LLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYST 256
Query: 427 DQYKL--ADAFS 456
Q + +DA S
Sbjct: 257 PQQTIIVSDAIS 268
>02_05_1133 +
34346894-34347121,34347222-34347283,34347373-34347460,
34348005-34348268,34348346-34348586,34348672-34348748,
34348837-34349007,34349084-34349176,34349257-34349406,
34349491-34349577,34349656-34349820,34349900-34350019,
34350244-34350446,34350547-34350696,34350779-34350926,
34351046-34351129,34351207-34351308
Length = 810
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 771 WVPR*SSYRTRSQDSVWSWFCPTKLTDYLXCWKXRPKXVYLK 896
W+P R ++ ++ WS FCP + CW + +Y K
Sbjct: 333 WIPDLFMERVQNNEN-WSLFCPNEAPGLADCWGDEFQNLYKK 373
>11_06_0305 +
22209640-22209736,22212679-22212941,22213444-22213530,
22214866-22214937,22215729-22215793,22215918-22216050,
22216397-22216477,22216599-22216688,22217954-22218103
Length = 345
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 94 RWCVERRRSTCSVMNSQGQD--SAMPSTRPPXKILKESYNLADDKNVIASPLGVMLLLSL 267
RWC E+ TC + + Q + +A P P I+ + A D +IA LL
Sbjct: 158 RWCNEKGDITCEICHEQYKHGYTAPPRVEPDDTIIDIGGDWARDPRIIAVAAAQRRLLET 217
Query: 268 -YESGAGAQS 294
Y+ AG +
Sbjct: 218 EYDEYAGTDA 227
>11_01_0771 + 6453130-6454488
Length = 452
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 529 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 642
IN WA T I + + P TAV + N I+F+G
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKG 214
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 220 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE 339
+N+ SPL V LSL +GA + +EI +LG +
Sbjct: 37 RNLAFSPLSVHAALSLAAAGAAGGTLDEILAVLGAASRDD 76
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFH 694
+G W PFN S+TE K F+
Sbjct: 213 KGKWDRPFNESDTERKPFY 231
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 447 RVLQDSESVQKRSGQH*LQRSEECR*YHQPLGGRTDSRTHKDSCERR 587
R L+D ++Q + + CR +PL R D RTH+ +C RR
Sbjct: 218 RPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCGRR 264
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1
Query: 508 PKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 642
PK + IN W + T I + + + T + + N I+F+G
Sbjct: 83 PKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKG 127
>02_02_0219 +
7985152-7985575,7985818-7985894,7986067-7986127,
7986276-7986519,7986613-7987006,7987292-7987729
Length = 545
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +1
Query: 319 GGGEAQESSHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNIN 498
GGG E+S YGLL R + P T+ + + ++ + +S + N R E N +
Sbjct: 233 GGGLPPEASRLYGLLQHRQS---PAIATMQTLDFKNSSFRNQE-WSFSFNHQRKETMNPS 288
Query: 499 FSAPKNAADIINRW 540
S+ AA I RW
Sbjct: 289 SSSSTTAA--IRRW 300
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,083,249
Number of Sequences: 37544
Number of extensions: 512871
Number of successful extensions: 1361
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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