Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B16
(910 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 50 2e-06
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 50 3e-06
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 49 6e-06
SB_17269| Best HMM Match : RRM_1 (HMM E-Value=8.2) 30 3.0
SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_30912| Best HMM Match : SEA (HMM E-Value=1.1) 29 3.9
SB_14194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_47865| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_59428| Best HMM Match : Ank (HMM E-Value=2.2) 29 5.2
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 28 9.1
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/144 (20%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +1
Query: 223 NVIASPLGVMLLLSLYESGAGAQSKEEIREILG-GGEAQESSHTYGLLNQRYAEFDPKFL 399
N+ SP +++ L++ GA + ++ + + E H + L + D +
Sbjct: 29 NLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDF-LQALNASNSDGNQI 87
Query: 400 TVANKIYVSDQYKLADAFSRTAN-LFRSEVDNINFSAPKNAA-DIINRWADEQTQGHIKT 573
+AN+++ +++ + F + + F +E+ +++ N A D +NRW +++T+ IK
Sbjct: 88 LMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKN 147
Query: 574 PVSEDKIDPATAVAMFNVIFFQGA 645
+ E + T + + N ++F+G+
Sbjct: 148 LIPEGMFNKDTILCLVNAVYFKGS 171
Score = 48.4 bits (110), Expect = 8e-06
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYKEPGFR 817
+G W FN + T+ F I+ M Y E+ LG +++ELPY
Sbjct: 169 KGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRYLESSTLGCQIVELPYAGEKLS 228
Query: 818 MVVVLPDXIDGL 853
MVV+LP+ +DGL
Sbjct: 229 MVVLLPNEVDGL 240
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 50.0 bits (114), Expect = 3e-06
Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Frame = +1
Query: 253 LLLSLYESGAGAQSKEEIREILGGGEAQ--ESSHTYGLLNQRYAEFDPKF--LTVANKIY 420
+ L L G+ + +I I G E++ E+ T+ ++ D + + + NKI+
Sbjct: 3 MALGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIW 62
Query: 421 VSDQYKLADAFSR-TANLFRSEVDNINF-SAPKNAADIINRWADEQTQGHIKTPVSEDKI 594
D++++ + F T + SE+ ++F + +A +N W +QT+G+IK + I
Sbjct: 63 GHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVI 122
Query: 595 DPATAVAMFNVIFFQG 642
+ T + + N ++F+G
Sbjct: 123 NSLTRLIIVNAVYFKG 138
Score = 36.3 bits (80), Expect = 0.034
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDE----KTTIKKPTMRLLQSLFYTENEELGAKMIELPYKE 805
+G W F T F V E K ++ T ++ + +Y + ++ +++ELPY
Sbjct: 137 KGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKMKVNFYY--DADIKCRVVELPYSG 194
Query: 806 PGFRMVVVLPDXIDGLPAXLEKXAEXGLLE 895
MV++LP+ G+ LEK + ++E
Sbjct: 195 DDTAMVIILPEEPSGI-FSLEKSIDVEIME 223
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 48.8 bits (111), Expect = 6e-06
Identities = 24/89 (26%), Positives = 40/89 (44%)
Frame = +2
Query: 638 RGHWHVPFNASETEEKDFHVDEKTTIKKPTMRLLQSLFYTENEELGAKMIELPYKEPGFR 817
+G W PF + +F ++ M Y +++ K++ELPY +
Sbjct: 132 KGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKFKYLHSDKYKCKLLELPYVDTQLS 191
Query: 818 MVVVLPDXIDGLPAXLEKXAEXGLLEDVF 904
MV+VLPD +GL A E+ + D+F
Sbjct: 192 MVLVLPDETEGL-ARFEQDLTHDKMTDIF 219
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/84 (16%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 397 LTVANKIYVSDQYKLADAFSRTAN-LFRSEVDNINFSAP-KNAADIINRWADEQTQGHIK 570
+++AN +++ + + F+ + +++ +++ + A +N+W +E+T+ I
Sbjct: 50 MSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKIC 109
Query: 571 TPVSEDKIDPATAVAMFNVIFFQG 642
++ + T + + N I+F+G
Sbjct: 110 DLIAPGVFNMLTRLTLVNAIYFKG 133
>SB_17269| Best HMM Match : RRM_1 (HMM E-Value=8.2)
Length = 157
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Frame = -1
Query: 355 RMCVMTLEPPLPQGFPLSLPWTV-----HRLQTRTRKAAASRR-EETLSHS-CRQ 212
R+C+ T PPLP F ++P + H T R + SRR + ++ H CRQ
Sbjct: 81 RICLSTFSPPLPPTFSPTIPPIITSSNFHTTATDGRSSCRSRRGKPSVQHPFCRQ 135
>SB_36789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 410 IKYTFPTSISWPTRSPGQRICSEAKWTTLTSALRRMPL 523
+ ++FP WP+ QR+ S W ++ + RR PL
Sbjct: 40 VYWSFPQLDPWPSVLAFQRVASHHSWPSVLACQRRGPL 77
>SB_30912| Best HMM Match : SEA (HMM E-Value=1.1)
Length = 354
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 222 ECDSVSSRRDAAAFLVRVWSRCTVQGRDKGNPWGR 326
E DSV + +D+ A W+R + + K NPW R
Sbjct: 262 EKDSVDTEKDSVATEKNPWTRRKIPWQRKKNPWTR 296
>SB_14194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 484 VDNINFSAPKNAADI--INRWADEQ-TQGHIKTPVSEDKIDPATAVAMFN 624
V ++ PK +A I + +W Q GH +TP S D + P A+ N
Sbjct: 1072 VTALHAKLPKGSASIDRVRKWVSSQPVGGHTQTPPSYDYLRPLLGAALVN 1121
>SB_47865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1273
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 630 NDVKHCNGRGGVNFVFAHRSLYVSLSLFVRPTVDDISGILRSAE 499
+D ++CN GVN V + L +F T D+S + R E
Sbjct: 444 DDKQYCNNSHGVNIVVLEMLTFKVLHVFSYETSRDLSAVCRMVE 487
>SB_59428| Best HMM Match : Ank (HMM E-Value=2.2)
Length = 351
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 632 SSRGHWHVPFNASETEEKDFHVDEKTTIKKPTMR 733
SS+ HW + N + +KDF V+ + K+ +R
Sbjct: 26 SSQSHWQITGNLEDEFDKDFWVEVRRKFKEDNVR 59
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 151 DSAMPSTRPPXKILKESYNLADDK 222
D + PS+RPP K+L ++ +L D+K
Sbjct: 506 DYSKPSSRPPSKVLVKAKSLDDEK 529
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,438,385
Number of Sequences: 59808
Number of extensions: 567959
Number of successful extensions: 2445
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2445
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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