Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B14
         (896 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.20 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   1.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   7.5  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +2

Query: 533 YYCHPTYEVSVYTIWSGQPWNRMFGNLTLI 622
           Y+    Y++  Y  W  + W+    NL L+
Sbjct: 61  YFISNVYQILAYNFWKKKYWSEFLANLKLL 90


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 145 QGRSVWRQTAFCFYKVRRATTKNTEKEETGLWXQKLKEXPSSEAV 11
           Q   V +QTA CF   R  T   TE  +  +  ++  +  +SEA+
Sbjct: 293 QPSQVHKQTAICFKAPRYHTLDITEPVKVFIQLRRPSDGATSEAL 337


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 536 YCHPTYEVSVYTIWSGQPWNRMFGNL 613
           YC   Y + V T +  + W R+  NL
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNL 101


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 363 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 253
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 363 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 253
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 100 VRRATTKNTEKEETGLWXQKLKEXPSSEAV 11
           VRRA     E  +T +  + LKE P+SE +
Sbjct: 465 VRRAFLDLKEDNKTQVAVKMLKESPTSEEI 494


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 423 EQLLLEGGVPGIAD 382
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,122
Number of Sequences: 336
Number of extensions: 3757
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)