Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B13
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   7.2  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   9.5  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 13/74 (17%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +1

Query: 460  NVEKNATALREKLQAAVQNTVQESQKLA---KKVSSNVQETNEKLAPKIKAAYDDFAKNT 630
            NV + A  L E+ +   +  ++  + +    KK+ + + + +E+   K+K A+ +  +N 
Sbjct: 980  NVNQKAMVLLEREEEQYKEVMRRKKVVEDDKKKIQAIITDLDEEKKKKLKVAWSEVDENF 1039

Query: 631  QEVIXKIQEAANAK 672
              +   +     A+
Sbjct: 1040 GSIFSTLLPGTQAR 1053


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -3

Query: 536 FWDSCTVFCTAACSFSRRAVAFFSTFRVGLAELLG 432
           FWD    FC   C FS     +F  FRV    L G
Sbjct: 407 FWDGGRDFCFLICLFSFPRY-YFIDFRVKPNSLWG 440


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,946
Number of Sequences: 2352
Number of extensions: 8216
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)