Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B11
         (908 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56986| Best HMM Match : Peptidase_M50 (HMM E-Value=3.8)             33   0.42 
SB_24992| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.9  
SB_23249| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.9  
SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22)                   28   9.1  
SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0)                 28   9.1  
SB_21012| Best HMM Match : A_amylase_inhib (HMM E-Value=7.9)           28   9.1  

>SB_56986| Best HMM Match : Peptidase_M50 (HMM E-Value=3.8)
          Length = 216

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
 Frame = +2

Query: 296 HVTHVHTKM---MNWYWRPLPILHVLCSTSHI---I*YWIL 400
           HV+ +H K+   MNWY  PL +LH++ + S +   + YW++
Sbjct: 106 HVSPLHVKVSEPMNWYHYPLWLLHIVAANSAVAVCLVYWMI 146


>SB_24992| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 402

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 380 CGKSNKAHGESGEVSNTNSSSLCGHVLHAADPHNKSSRK 264
           CG  N AH  +G  S   + ++C   L  AD  N+S RK
Sbjct: 6   CGGGNGAHALAGVASADPNINVCVFTLSNADRWNESMRK 44


>SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2496

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 457 ILQTVLEEVKHQNTAVFQRLLDII 528
           +LQTV+    H+N AVF+  L+I+
Sbjct: 492 LLQTVMRRTHHENRAVFKNNLEIV 515


>SB_23249| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 179

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 457 ILQTVLEEVKHQNTAVFQRLLDII 528
           +LQTV+    H+N AVF+  L+I+
Sbjct: 64  LLQTVMRRTHHENRAVFKNNLEIV 87


>SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22)
          Length = 767

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 405 CVTSNXCFGGRCFD*CYH 458
           CVT++ CFG    D CYH
Sbjct: 719 CVTTHVCFGDYANDCCYH 736


>SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0)
          Length = 561

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 373 FPHYLVLDTNVVLHQIXVLEEDALTNVIIL 462
           FP  L LD++++   + V EE+ +TN I+L
Sbjct: 256 FPPRLSLDSHMIGAMLGVFEEEKVTNAIVL 285


>SB_21012| Best HMM Match : A_amylase_inhib (HMM E-Value=7.9)
          Length = 129

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 405 CVTSNXCFGGRCFD*CYH 458
           CVT++ CFG    D CYH
Sbjct: 81  CVTTHVCFGDYANDCCYH 98


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,692,143
Number of Sequences: 59808
Number of extensions: 432384
Number of successful extensions: 952
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)