Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B11
(908 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052150-1|AAK93574.1| 982|Drosophila melanogaster SD10981p pro... 190 2e-48
AJ276897-1|CAC35051.1| 983|Drosophila melanogaster putative exo... 190 2e-48
AE014297-3526|AAF56281.1| 982|Drosophila melanogaster CG6413-PA... 190 2e-48
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 30 5.0
AY051633-1|AAK93057.1| 279|Drosophila melanogaster GH28353p pro... 29 6.7
AE014298-2660|AAF48796.2| 279|Drosophila melanogaster CG7206-PA... 29 6.7
AE014298-2659|AAS65397.1| 404|Drosophila melanogaster CG7206-PB... 29 6.7
AY058276-1|AAL13505.1| 399|Drosophila melanogaster GH02863p pro... 29 8.8
AE013599-207|AAM70815.1| 440|Drosophila melanogaster CG3270-PA ... 29 8.8
>AY052150-1|AAK93574.1| 982|Drosophila melanogaster SD10981p
protein.
Length = 982
Score = 190 bits (463), Expect = 2e-48
Identities = 97/191 (50%), Positives = 125/191 (65%), Gaps = 7/191 (3%)
Frame = +1
Query: 193 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPDSPCALFD 372
M T + F KTKRGNILKIVREHYLRDD+ CGS C C +++ L + + LF
Sbjct: 1 MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSELCREC-FQNEVYQLTSQHANKSTLFK 59
Query: 373 FPHYLVLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFQRLLDIISNKKRKFY 552
FPHYLVLDTNVVL QI VLEED L NV++L TVL EVKH+++A+++R +I+ ++ R FY
Sbjct: 60 FPHYLVLDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDRTRNFY 119
Query: 553 SFVNEXHKDTYIERSPGEKQNDRNDXSIRKAPSWHEYXLSIN------SLDGK-XPKIXL 711
FVNE HK+TY +R P E NDRND +IR A W++ L + GK ++ L
Sbjct: 120 VFVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAATRVVL 179
Query: 712 VTDDENNRXLA 744
+TDD NR A
Sbjct: 180 LTDDAANRAKA 190
>AJ276897-1|CAC35051.1| 983|Drosophila melanogaster putative
exoribonuclease DIS3 protein.
Length = 983
Score = 190 bits (463), Expect = 2e-48
Identities = 97/191 (50%), Positives = 125/191 (65%), Gaps = 7/191 (3%)
Frame = +1
Query: 193 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPDSPCALFD 372
M T + F KTKRGNILKIVREHYLRDD+ CGS C C +++ L + + LF
Sbjct: 1 MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSELCREC-FQNEVYQLTSQHANKSTLFK 59
Query: 373 FPHYLVLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFQRLLDIISNKKRKFY 552
FPHYLVLDTNVVL QI VLEED L NV++L TVL EVKH+++A+++R +I+ ++ R FY
Sbjct: 60 FPHYLVLDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDRTRNFY 119
Query: 553 SFVNEXHKDTYIERSPGEKQNDRNDXSIRKAPSWHEYXLSIN------SLDGK-XPKIXL 711
FVNE HK+TY +R P E NDRND +IR A W++ L + GK ++ L
Sbjct: 120 VFVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAATRVVL 179
Query: 712 VTDDENNRXLA 744
+TDD NR A
Sbjct: 180 LTDDAANRAKA 190
>AE014297-3526|AAF56281.1| 982|Drosophila melanogaster CG6413-PA
protein.
Length = 982
Score = 190 bits (463), Expect = 2e-48
Identities = 97/191 (50%), Positives = 125/191 (65%), Gaps = 7/191 (3%)
Frame = +1
Query: 193 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPDSPCALFD 372
M T + F KTKRGNILKIVREHYLRDD+ CGS C C +++ L + + LF
Sbjct: 1 MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSELCREC-FQNEVYQLTSQHANKSTLFK 59
Query: 373 FPHYLVLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFQRLLDIISNKKRKFY 552
FPHYLVLDTNVVL QI VLEED L NV++L TVL EVKH+++A+++R +I+ ++ R FY
Sbjct: 60 FPHYLVLDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDRTRNFY 119
Query: 553 SFVNEXHKDTYIERSPGEKQNDRNDXSIRKAPSWHEYXLSIN------SLDGK-XPKIXL 711
FVNE HK+TY +R P E NDRND +IR A W++ L + GK ++ L
Sbjct: 120 VFVNEHHKETYADREPDETANDRNDRAIRLATKWYDDHLQASQSSKEFERSGKAATRVVL 179
Query: 712 VTDDENNRXLA 744
+TDD NR A
Sbjct: 180 LTDDAANRAKA 190
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.9 bits (64), Expect = 5.0
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 405 CVTSNXCFGGRCFD*CYHFTN-CT 473
C+ C GG+C C +FTN CT
Sbjct: 8137 CLDEQTCIGGQCISPCEYFTNLCT 8160
>AY051633-1|AAK93057.1| 279|Drosophila melanogaster GH28353p
protein.
Length = 279
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 316 KDDELVLETSPDS---PCALFDFPHYLVLDTNVVLHQIXVLEEDALTNVIILQTV 471
+DD +++ + D+ P L D+ Y VLDTNV++H +E LT+V++ TV
Sbjct: 105 EDDTILMLQAADAEELPPRLEDYM-YFVLDTNVLIHNHKFVER--LTDVVLPGTV 156
>AE014298-2660|AAF48796.2| 279|Drosophila melanogaster CG7206-PA,
isoform A protein.
Length = 279
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 316 KDDELVLETSPDS---PCALFDFPHYLVLDTNVVLHQIXVLEEDALTNVIILQTV 471
+DD +++ + D+ P L D+ Y VLDTNV++H +E LT+V++ TV
Sbjct: 105 EDDTILMLQAADAEELPPRLEDYM-YFVLDTNVLIHNHKFVER--LTDVVLPGTV 156
>AE014298-2659|AAS65397.1| 404|Drosophila melanogaster CG7206-PB,
isoform B protein.
Length = 404
Score = 29.5 bits (63), Expect = 6.7
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 316 KDDELVLETSPDS---PCALFDFPHYLVLDTNVVLHQIXVLEEDALTNVIILQTV 471
+DD +++ + D+ P L D+ Y VLDTNV++H +E LT+V++ TV
Sbjct: 230 EDDTILMLQAADAEELPPRLEDYM-YFVLDTNVLIHNHKFVER--LTDVVLPGTV 281
>AY058276-1|AAL13505.1| 399|Drosophila melanogaster GH02863p
protein.
Length = 399
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 262 YLRDDLLCGSAACNTCPHKDDELVLET 342
Y R D LCG+ C P++D+E ET
Sbjct: 262 YFRRDGLCGNFLCGRSPNEDEEPECET 288
>AE013599-207|AAM70815.1| 440|Drosophila melanogaster CG3270-PA
protein.
Length = 440
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 262 YLRDDLLCGSAACNTCPHKDDELVLET 342
Y R D LCG+ C P++D+E ET
Sbjct: 303 YFRRDGLCGNFLCGRSPNEDEEPECET 329
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,830,401
Number of Sequences: 53049
Number of extensions: 652242
Number of successful extensions: 1367
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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