Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B10
         (902 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.94 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   6.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   8.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -1

Query: 311 RDDLSRMPGRIEVVGVFRRFF--LGALLT 231
           +D+L + P RI   G+FRRF+  LG L T
Sbjct: 538 KDELGK-PSRISKQGLFRRFYNLLGKLST 565


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 681 NYYMFNLSLRDTQWTVIXI 737
           NYY+FNL++ D  + ++ +
Sbjct: 69  NYYLFNLAVSDLLFLILGL 87


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 171 RMLLTYLRLAFGINIKYKKS 112
           RM+LT     F + IKY KS
Sbjct: 287 RMILTEAYTEFNLTIKYYKS 306


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/18 (38%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -3

Query: 432 RPPF-VWQLNSPSASHSC 382
           RP +  W+LN+ ++ H+C
Sbjct: 8   RPSYCTWELNATNSPHTC 25


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
 Frame = -2

Query: 631 EIRHWNGVTSKIYRLTAWLICGVVPF*IAASVSGRSRNFV*VKNALD-----VPSISETS 467
           E+RH   V +K Y     L  G+V F    +    S   V + N L+        +++  
Sbjct: 395 ELRHSRPVPAKKYDCVTLLFSGIVGFGAYCAAHTDSSGAVKIVNMLNQLYTAFDVLTDPK 454

Query: 466 IHPNTPRVSAIASSF 422
            +PN  +V  +   +
Sbjct: 455 KNPNVYKVETVGDKY 469


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = -2

Query: 466 IHPNTPRVSAIASSFR 419
           IHP  PR+ ++ ++++
Sbjct: 160 IHPGDPRIKSVVTAYK 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,150
Number of Sequences: 438
Number of extensions: 4306
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)