Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B09
         (1336 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.8  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   6.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 686 SPPXPPPXXPYXXPXAXHPRXXPPXNR 766
           +PP PPP  P   P A  P   P  +R
Sbjct: 584 APPPPPPMGPPPSPLAGGPLGGPAGSR 610


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -3

Query: 755 GGXYVGGXXXGSGKXXGEGXXAGSGG 678
           GG  VGG   GSG   G G   GSGG
Sbjct: 672 GGGAVGG---GSGAGGGAGSSGGSGG 694



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -3

Query: 755 GGXYVGGXXXGSGKXXGEGXXAGSGGXXXXXGG 657
           GG   GG   GS    G G   G G      GG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGG 872


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -3

Query: 794 GGXXXXXXXXGXXGGXYVGGXXXGSGKXXGEGXXAGSGG 678
           GG        G  G    GG   G G+  G G   G GG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGG 93



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 12/36 (33%), Positives = 13/36 (36%)
 Frame = -3

Query: 764 GXXGGXYVGGXXXGSGKXXGEGXXAGSGGXXXXXGG 657
           G  GG   G    G G+  G G     GG     GG
Sbjct: 63  GYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,196
Number of Sequences: 2352
Number of extensions: 5947
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 153210915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)