Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B08
(884 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 157 5e-37
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 117 3e-25
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 105 1e-21
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 99 1e-19
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 86 1e-15
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 81 3e-14
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 79 2e-13
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 77 5e-13
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 51 5e-05
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 48 4e-04
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 48 4e-04
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 44 0.005
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 44 0.007
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 43 0.009
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 43 0.009
UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis... 43 0.012
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 43 0.012
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 41 0.048
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 41 0.048
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 40 0.064
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 40 0.084
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 39 0.15
UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter... 38 0.45
UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; ... 37 0.79
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 36 1.0
UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol... 36 1.4
UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putati... 36 1.4
UniRef50_Q852P0 Cluster: Pherophorin; n=2; Eukaryota|Rep: Pherop... 36 1.8
UniRef50_Q4A2U1 Cluster: Putative membrane protein precursor; n=... 35 2.4
UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;... 33 7.3
UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8; ... 33 7.3
UniRef50_P93797 Cluster: Pherophorin-S precursor; n=1; Volvox ca... 33 9.7
UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick... 33 9.7
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 33 9.7
UniRef50_P14605 Cluster: Adenylate cyclase; n=1; Schizosaccharom... 33 9.7
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 157 bits (380), Expect = 5e-37
Identities = 83/134 (61%), Positives = 90/134 (67%)
Frame = +1
Query: 97 APRKNKVAKEXVQVTLGPQHLVGXTVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMK 276
APRK K KE ++LGPQ G VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMK
Sbjct: 2 APRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMK 61
Query: 277 VXADRDEASPYAAMLAAQDVAEKCKTLGHNGLAHKAPCYWWKQNXDPWXXXXXXXXXXXX 456
V ADRDE+SPYAAMLAAQDVA++CK LG L K + P
Sbjct: 62 VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTP-GPGAQSALRALA 120
Query: 457 RSSMKIGRIEDVTP 498
RS MKIGRIEDVTP
Sbjct: 121 RSGMKIGRIEDVTP 134
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/70 (48%), Positives = 41/70 (58%)
Frame = +2
Query: 341 RNAKLLXITALHIKLRATGGNKTKTPGSWCSVCTSGSXLVQV*RLAALKMSPPXPSDSTR 520
+ K L ITALHIKLRATGGN+TKTPG + ++ ++ P PSDSTR
Sbjct: 83 QRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGM-KIGRIEDVTPIPSDSTR 141
Query: 521 XXGGRXGRXL 550
GGR GR L
Sbjct: 142 RKGGRRGRRL 151
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 117 bits (282), Expect = 3e-25
Identities = 55/87 (63%), Positives = 65/87 (74%)
Frame = +1
Query: 112 KVAKEXVQVTLGPQHLVGXTVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADR 291
+++K+ GP G V+GV HIFASFNDTFVHVTD+SGRET +VTGGMKV ADR
Sbjct: 9 RMSKKQEVKAYGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADR 68
Query: 292 DEASPYAAMLAAQDVAEKCKTLGHNGL 372
DE+SPYAAM+AAQDV +CK G N L
Sbjct: 69 DESSPYAAMMAAQDVVARCKECGINAL 95
Score = 33.9 bits (74), Expect = 5.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 362 ITALHIKLRATGGNKTKTPG 421
I ALH+K+RA GG +TK+PG
Sbjct: 92 INALHVKMRAVGGVRTKSPG 111
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 105 bits (253), Expect = 1e-21
Identities = 51/69 (73%), Positives = 54/69 (78%)
Frame = +1
Query: 97 APRKNKVAKEXVQVTLGPQHLVGXTVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMK 276
APRK K KE VQV LGPQ G VF V HI+AS+NDTFVHVTDLSGRETI RVTGG K
Sbjct: 2 APRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQK 61
Query: 277 VXADRDEAS 303
V ADRDE+S
Sbjct: 62 VKADRDESS 70
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 99.1 bits (236), Expect = 1e-19
Identities = 53/93 (56%), Positives = 60/93 (64%)
Frame = +1
Query: 220 HVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTLGHNGLAHKAPCYWW 399
HVTDLSG+ET++R TGGMKV ADRDE+SPYAAMLAAQDVA +CK LG L K
Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRAKGG 149
Query: 400 KQNXDPWXXXXXXXXXXXXRSSMKIGRIEDVTP 498
+ P RS +KIGRIEDVTP
Sbjct: 150 NKTKSP-GPGGQSALRALSRSGIKIGRIEDVTP 181
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +2
Query: 350 KLLXITALHIKLRATGGNKTKTPGSWCSVCTSGSXLVQV*RLAALKMSPPXPSDSTRXXG 529
K L ITALHIK+RA GGNKTK+PG + ++ ++ P P+DSTR G
Sbjct: 133 KELGITALHIKMRAKGGNKTKSPGPGGQSALRALSRSGI-KIGRIEDVTPTPTDSTRRKG 191
Query: 530 GRXGRXL*SAFRF 568
GR GR + +F
Sbjct: 192 GRRGRRFTTTSQF 204
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/40 (60%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 103 RKNKVAKEXVQVT-LGPQHLVGXTVFGVAHIFASFNDTFV 219
R V+ V T +GPQ G VFGVAHIFASFNDTFV
Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 85.8 bits (203), Expect = 1e-15
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = +1
Query: 175 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKT 354
+G+ HI++S+N+T +H TD++G ETIARV+GG RDE SPYAAM AA +AE K
Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKE 68
Query: 355 LGHNGLAHK--APCYWWKQNXDPWXXXXXXXXXXXXRSSMKIGRIEDVTP 498
G + K AP ++N P R+ ++IGRIEDVTP
Sbjct: 69 RGIENIHIKVRAPGGSGQKNPGP---GAQAAIRALARAGLRIGRIEDVTP 115
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 81.4 bits (192), Expect = 3e-14
Identities = 42/107 (39%), Positives = 61/107 (57%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
G+AHI++S+N+T +H+TDL+G ET++ +GG+ V ADR E+SP+AAM AA V E +
Sbjct: 76 GIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAANKVIESARAK 135
Query: 358 GHNGLAHKAPCYWWKQNXDPWXXXXXXXXXXXXRSSMKIGRIEDVTP 498
G G + + P R +IGRI+DVTP
Sbjct: 136 GFTGFHIRVRAVGGVGSRVP-GPGAQAAIRALARGGFRIGRIDDVTP 181
Score = 36.3 bits (80), Expect = 1.0
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 344 NAKLLXITALHIKLRATGGNKTKTPGSWCSVCTSGSXLVQV*RLAALKMSPPXPSDSTRX 523
+A+ T HI++RA GG ++ PG R+ + P P D+TR
Sbjct: 131 SARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGF-RIGRIDDVTPIPHDTTRK 189
Query: 524 XGGRXGR 544
GG+ GR
Sbjct: 190 KGGKRGR 196
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 78.6 bits (185), Expect = 2e-13
Identities = 43/109 (39%), Positives = 58/109 (53%)
Frame = +1
Query: 172 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCK 351
+FG+ HI ++ NDT +HVTD++G ETI+R++ G+ +D+ S Y AMLA Q V+ CK
Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCK 70
Query: 352 TLGHNGLAHKAPCYWWKQNXDPWXXXXXXXXXXXXRSSMKIGRIEDVTP 498
LG N L K + R KIGRIED TP
Sbjct: 71 VLGINALHIKIRARGGNAS-HLISTGAHTVVTTLVRLGFKIGRIEDTTP 118
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 77.4 bits (182), Expect = 5e-13
Identities = 45/108 (41%), Positives = 59/108 (54%)
Frame = +1
Query: 175 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKT 354
+ VAH+++S NDT + +TDLSG ETIA +GGM V AD E SPYAAM AA VA + K
Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKE 105
Query: 355 LGHNGLAHKAPCYWWKQNXDPWXXXXXXXXXXXXRSSMKIGRIEDVTP 498
G + + + P RS +++ RIEDVTP
Sbjct: 106 KGITNINIEIRAPGGHGSKTP-GHGAQAVVRVLARSGLRVNRIEDVTP 152
Score = 39.9 bits (89), Expect = 0.084
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 347 AKLLXITALHIKLRATGGNKTKTPGSWCSVCTSGSXLVQV*RLAALKMSPPXPSDSTRXX 526
AK IT ++I++RA GG+ +KTPG + R+ ++ P P+D+TR
Sbjct: 103 AKEKGITNINIEIRAPGGHGSKTPGHGAQAVVRVLARSGL-RVNRIEDVTPIPTDTTRRP 161
Query: 527 GGRXGR 544
GG+ GR
Sbjct: 162 GGKRGR 167
>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_246, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 182
Score = 50.8 bits (116), Expect = 5e-05
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 244 ETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
ET+ R TGGMK D +E+SP AAM AAQDV+++CK L
Sbjct: 50 ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKEL 87
Score = 38.7 bits (86), Expect = 0.19
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 341 RNAKLLXITALHIKLRATGGNKTKTPG 421
+ K L IT LH+KL A GNKTKTPG
Sbjct: 82 QECKELDITVLHVKLHAARGNKTKTPG 108
>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 104
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 244 ETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
ET+ R TGGMK AD +E+SP AAM AAQDV+++ K L
Sbjct: 29 ETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKEL 66
>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 332
Score = 47.6 bits (108), Expect = 4e-04
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 259 VTGGMKVXADRDEASPYAAMLAAQDVAEKCK 351
V GGMK+ AD DE+SPYAAML +QDVA CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1
Query: 271 MKVXADRDEASPYAAMLAAQDVAEKCKTLGHNGL 372
MK AD+DE+SP AML AQDV ++CK LG L
Sbjct: 1 MKEQADQDESSPCTAMLTAQDVVQRCKELGITAL 34
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 341 RNAKLLXITALHIKLRATGGNKTKTPG 421
+ K L ITALHIKL ATGGN+TKTPG
Sbjct: 24 QRCKELGITALHIKLLATGGNRTKTPG 50
>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
pomeroyi
Length = 130
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
GVAH+ ++FN+T + ++D+ G G M R +++PYAA LAA+D K +
Sbjct: 20 GVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKAQDH 78
Query: 358 G 360
G
Sbjct: 79 G 79
>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
Rattus norvegicus
Length = 119
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 136 VTLGPQHLVGXTVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMK 276
++L PQ + G V GV +IFASF D+F++ TD+ G+ T VT MK
Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMK 52
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
G+AHI A+FN+T V +TD+ G G + R +++P+AA +AA+ A+ +
Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEH 75
Query: 358 G 360
G
Sbjct: 76 G 76
>UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S11 -
Victivallis vadensis ATCC BAA-548
Length = 148
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
G+A++ A+FN+T V TDL G I TGG +++ YAA + A D A+K + +
Sbjct: 38 GIAYVLATFNNTKVTFTDLHG-NVICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLV 96
Query: 358 G 360
G
Sbjct: 97 G 97
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
G+AHI ASFN+T V +TD G +GG R +++P+AA +AA+ +
Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAAAQDY 78
Query: 358 GHNGL 372
G L
Sbjct: 79 GLKNL 83
>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
organisms|Rep: Ribosomal protein S11 - Chlorokybus
atmophyticus (Soil alga)
Length = 262
Score = 40.7 bits (91), Expect = 0.048
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +1
Query: 163 GXTVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAE 342
G GVAHI + N+T + +TDL G +G + R + S YAA AA+ A+
Sbjct: 147 GVQRLGVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAK 205
Query: 343 KCKTLG 360
K LG
Sbjct: 206 KSIQLG 211
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 40.7 bits (91), Expect = 0.048
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
G+AHI ASFN+T V ++D SG + +G + R + +P+AA AA A +
Sbjct: 32 GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQAAMTAANMARDH 90
Query: 358 GHNGL 372
G L
Sbjct: 91 GMRSL 95
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 40.3 bits (90), Expect = 0.064
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQ 330
G+AH+ ASFN+T + +TD G +GG R +++P+AA +A++
Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASE 73
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 39.9 bits (89), Expect = 0.084
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKC--K 351
GVAHI ++FN+T V +TD +G G + R +++P+AA LA + A+ +
Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGEAAAKAAMEQ 80
Query: 352 TLGHNGLAHKAPCYW 396
+ ++ K P W
Sbjct: 81 NMHSVAISVKGPGIW 95
>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
organisms|Rep: 30S ribosomal protein S11 - Bacillus
subtilis
Length = 131
Score = 39.1 bits (87), Expect = 0.15
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAE 342
G+AHI ++FN+T V +TD G G + R +++P+AA +AA+ A+
Sbjct: 21 GIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMAAETAAK 74
>UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33;
Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma
pulmonis
Length = 136
Score = 37.5 bits (83), Expect = 0.45
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTL 357
GVAHI ++ N+T V +D G I+ + G + + YAA LAAQ+ +EK K
Sbjct: 21 GVAHIHSTHNNTIVTFSDEKG-NVISWASSGTIGYKGTKKKTAYAAGLAAQNASEKAKEH 79
Query: 358 G 360
G
Sbjct: 80 G 80
>UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29;
Magnoliophyta|Rep: Small subunit ribosomal protein -
Berberis thunbergii (Japanese barberry)
Length = 150
Score = 36.7 bits (81), Expect = 0.79
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +1
Query: 181 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTLG 360
+ H+ N+TFV VTD G + G ++ S YAA A+ V + LG
Sbjct: 46 LVHLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLG 105
Query: 361 HNGLAHK 381
+ K
Sbjct: 106 MKSVVMK 112
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 36.3 bits (80), Expect = 1.0
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAA 327
GV H+ ASFN+T V VTD+ GR I+ + G +P+AA AA
Sbjct: 28 GVIHVQASFNNTIVTVTDVRGR-VISWSSAGTCGFRGTRRGTPFAAQTAA 76
>UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole
genome shotgun sequence; n=3; cellular organisms|Rep:
Chromosome undetermined SCAF14706, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 35.9 bits (79), Expect = 1.4
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +1
Query: 181 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTLG 360
+AH+ A++N+T + VTD +G+ ++ R + G + + +++P AA A A K G
Sbjct: 106 IAHVKATYNNTHIQVTDSAGK-SMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKG 164
>UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putative;
n=19; Spermatophyta|Rep: Small subunit ribosomal
protein, putative - Oryza sativa subsp. japonica (Rice)
Length = 366
Score = 35.9 bits (79), Expect = 1.4
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 187 HIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTLGHN 366
H+ N TFV VTD+ G + G ++ R S YAA A+ V + +G
Sbjct: 248 HVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLK 307
Query: 367 GLAHK 381
+ K
Sbjct: 308 SVVMK 312
>UniRef50_Q852P0 Cluster: Pherophorin; n=2; Eukaryota|Rep:
Pherophorin - Volvox carteri f. nagariensis
Length = 606
Score = 35.5 bits (78), Expect = 1.8
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P P PPP P P P S P P P PP PP S P
Sbjct: 227 PSPPPPPPPPPPPSPPPPPPPPPPPSPPPPPPPPSPSPPPPPPSPSPPPPPPPPSPP 283
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPP 844
P P PPP P P P S P P P PP PP
Sbjct: 238 PPSPPPPPPPPPPPSPPPPPPPPSPSPPPPPPSPSPPPPPPPPSPPPAPP 287
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P P PPP P P P P P P PP PP S P
Sbjct: 209 PPPPPPPSPPPPPPPPPPPSPPPPPPPPPPPSPPPPPPPPPPPSPPPPPPPPSPSPP 265
>UniRef50_Q4A2U1 Cluster: Putative membrane protein precursor; n=1;
Emiliania huxleyi virus 86|Rep: Putative membrane
protein precursor - Emiliania huxleyi virus 86
Length = 2873
Score = 35.1 bits (77), Expect = 2.4
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 701 FPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
FP PPP P P P S P P P PP PP P
Sbjct: 202 FPSPPPPPPPPPLPPPPPPPPPPSPPPPSPPPPPPPSPPPPSPPPPPPPSPPPPP 256
>UniRef50_Q8L685 Cluster: Pherophorin-dz1 protein precursor; n=1;
Volvox carteri f. nagariensis|Rep: Pherophorin-dz1
protein precursor - Volvox carteri f. nagariensis
Length = 1009
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P P PPP P P P P P P PP PP S P
Sbjct: 624 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPLPPSPP 680
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P P PPP P P P P P P PP PP P
Sbjct: 238 PPLPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 294
>UniRef50_Q3HTK5 Cluster: Pherophorin-C2 protein precursor; n=8;
Chlamydomonadales|Rep: Pherophorin-C2 protein precursor
- Chlamydomonas reinhardtii
Length = 853
Score = 33.5 bits (73), Expect = 7.3
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 692 APXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPP 844
+P P PPP P P P S P P P PP PP
Sbjct: 262 SPPPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPPP 312
>UniRef50_P93797 Cluster: Pherophorin-S precursor; n=1; Volvox
carteri|Rep: Pherophorin-S precursor - Volvox carteri
Length = 599
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPP 844
P P PPP P P P S P P P PP PP
Sbjct: 251 PSPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPP 300
>UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S11 - Neorickettsia sennetsu (strain Miyayama)
Length = 120
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 172 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCK 351
V G AH+ +FN+ ++ VTD G +G + ++ +++ YAA A + K K
Sbjct: 8 VSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNK-KSTAYAAQSVATTLMTKLK 66
Query: 352 TLG 360
+G
Sbjct: 67 RIG 69
>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
Epifagus virginiana (Beechdrops)
Length = 136
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 178 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAA 327
GV H+ SFN+T V VTD+ GR ++ + G + +AA +AA
Sbjct: 28 GVIHVQTSFNNTIVAVTDIKGR-VVSWSSAGTCGFKGTRRGTSFAAQIAA 76
>UniRef50_P14605 Cluster: Adenylate cyclase; n=1; Schizosaccharomyces
pombe|Rep: Adenylate cyclase - Schizosaccharomyces pombe
(Fission yeast)
Length = 1692
Score = 33.1 bits (72), Expect = 9.7
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 299 RHPTLLCWRHRM*XRNAKLLXITALHIKLRATGGNKTKTPGSWCSVC 439
++ TLL RH + R+A T + +LRATGG + KT G VC
Sbjct: 1339 KNSTLLWERHPIAMRSAIKTHNTIMRRQLRATGGYEVKTEGDAFMVC 1385
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,028,486
Number of Sequences: 1657284
Number of extensions: 9546603
Number of successful extensions: 25713
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 16295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21408
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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