Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B08
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      24   1.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.7  

>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 151 QHLVGXTVFGVAHIFASFNDTFVHVTDLSGRETI 252
           +H+VG  V  V  ++ SFN T  +V D   RE I
Sbjct: 21  EHMVGTIVVVVRGVWVSFNQTAQNV-DTFVREQI 53


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 410 KTPGSWCSVCTSGSXLVQ 463
           K PG  C++C + + LV+
Sbjct: 723 KVPGECCAICVNATSLVE 740


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 143 SGPSI*WAXQCLV*HTFSLHSMTXSFML 226
           S P+I W  QC+  + F  ++   +++L
Sbjct: 194 SHPNITWYQQCVTYNVFPTYAHELTYLL 221


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 143 SGPSI*WAXQCLV*HTFSLHSMTXSFML 226
           S P+I W  QC+  + F  ++   +++L
Sbjct: 194 SHPNITWYQQCVTYNVFPTYAHELTYLL 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,635
Number of Sequences: 336
Number of extensions: 2316
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)