Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B08
(884 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36160.1 68415.m04438 40S ribosomal protein S14 (RPS14A) 146 2e-35
At3g11510.1 68416.m01403 40S ribosomal protein S14 (RPS14B) simi... 144 5e-35
At3g52580.1 68416.m05790 40S ribosomal protein S14 (RPS14C) ribo... 144 9e-35
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 0.77
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 31 0.77
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 1.0
At1g31817.1 68414.m03907 chloroplast 30S ribosomal protein S11, ... 31 1.0
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 30 1.8
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 4.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 4.1
At1g61080.1 68414.m06877 proline-rich family protein 29 4.1
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 28 7.2
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 28 7.2
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 28 7.2
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 28 9.5
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 28 9.5
>At2g36160.1 68415.m04438 40S ribosomal protein S14 (RPS14A)
Length = 150
Score = 146 bits (354), Expect = 2e-35
Identities = 79/132 (59%), Positives = 87/132 (65%)
Frame = +1
Query: 103 RKNKVAKEXVQVTLGPQHLVGXTVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVX 282
RK K K V VTLGP G VFGV HIFASFNDTF+HVTDLSGRET+ R+TGGMKV
Sbjct: 4 RKTKEPKVDV-VTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 62
Query: 283 ADRDEASPYAAMLAAQDVAEKCKTLGHNGLAHKAPCYWWKQNXDPWXXXXXXXXXXXXRS 462
ADRDE+SPYAAMLAAQDVA++CK LG + K + P RS
Sbjct: 63 ADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTP-GPGAQSALRALARS 121
Query: 463 SMKIGRIEDVTP 498
MKIGRIEDVTP
Sbjct: 122 GMKIGRIEDVTP 133
Score = 61.3 bits (142), Expect = 8e-10
Identities = 32/70 (45%), Positives = 41/70 (58%)
Frame = +2
Query: 341 RNAKLLXITALHIKLRATGGNKTKTPGSWCSVCTSGSXLVQV*RLAALKMSPPXPSDSTR 520
+ K L ITA+H+KLRATGGNKTKTPG + ++ ++ P P+DSTR
Sbjct: 82 QRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGM-KIGRIEDVTPIPTDSTR 140
Query: 521 XXGGRXGRXL 550
GGR GR L
Sbjct: 141 RKGGRRGRRL 150
>At3g11510.1 68416.m01403 40S ribosomal protein S14 (RPS14B) similar
to 40S ribosomal protein S14 GB:P19950 [Zea mays]
Length = 150
Score = 144 bits (350), Expect = 5e-35
Identities = 77/132 (58%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
Frame = +1
Query: 106 KNKVAKEXVQ-VTLGPQHLVGXTVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVX 282
K K + V+ VTLGP G VFGV HIFASFNDTF+HVTDLSGRET+ R+TGGMKV
Sbjct: 3 KRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 62
Query: 283 ADRDEASPYAAMLAAQDVAEKCKTLGHNGLAHKAPCYWWKQNXDPWXXXXXXXXXXXXRS 462
ADRDE+SPYAAMLAAQDVA++CK LG + K + P RS
Sbjct: 63 ADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTP-GPGAQSALRALARS 121
Query: 463 SMKIGRIEDVTP 498
MKIGRIEDVTP
Sbjct: 122 GMKIGRIEDVTP 133
Score = 61.3 bits (142), Expect = 8e-10
Identities = 32/70 (45%), Positives = 41/70 (58%)
Frame = +2
Query: 341 RNAKLLXITALHIKLRATGGNKTKTPGSWCSVCTSGSXLVQV*RLAALKMSPPXPSDSTR 520
+ K L ITA+H+KLRATGGNKTKTPG + ++ ++ P P+DSTR
Sbjct: 82 QRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGM-KIGRIEDVTPIPTDSTR 140
Query: 521 XXGGRXGRXL 550
GGR GR L
Sbjct: 141 RKGGRRGRRL 150
>At3g52580.1 68416.m05790 40S ribosomal protein S14 (RPS14C)
ribosomal protein S14 -Zea mays,PIR2:A30097
Length = 150
Score = 144 bits (348), Expect = 9e-35
Identities = 76/132 (57%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
Frame = +1
Query: 106 KNKVAKEXVQ-VTLGPQHLVGXTVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVX 282
K K + V+ VTLGP G VFGV H+FASFNDTF+HVTDLSGRET+ R+TGGMKV
Sbjct: 3 KRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKVK 62
Query: 283 ADRDEASPYAAMLAAQDVAEKCKTLGHNGLAHKAPCYWWKQNXDPWXXXXXXXXXXXXRS 462
ADRDE+SPYAAMLAAQDVA++CK LG + K + P RS
Sbjct: 63 ADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTP-GPGAQSALRALARS 121
Query: 463 SMKIGRIEDVTP 498
MKIGRIEDVTP
Sbjct: 122 GMKIGRIEDVTP 133
Score = 61.3 bits (142), Expect = 8e-10
Identities = 32/70 (45%), Positives = 41/70 (58%)
Frame = +2
Query: 341 RNAKLLXITALHIKLRATGGNKTKTPGSWCSVCTSGSXLVQV*RLAALKMSPPXPSDSTR 520
+ K L ITA+H+KLRATGGNKTKTPG + ++ ++ P P+DSTR
Sbjct: 82 QRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARSGM-KIGRIEDVTPIPTDSTR 140
Query: 521 XXGGRXGRXL 550
GGR GR L
Sbjct: 141 RKGGRRGRRL 150
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 692 APXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPP 844
+P P PPP P P P P P P PP PP
Sbjct: 378 SPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPP 428
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 725 PPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
PPP P P P P P P PP PP P
Sbjct: 382 PPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPP 428
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 728 PPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
PP P P P P P P PP PP S P
Sbjct: 376 PPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPP 421
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPP 844
P P PPP P P S P P P PP PP
Sbjct: 387 PPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPP 436
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 692 APXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPP 823
+P P PPP P P P P P P PP
Sbjct: 375 SPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPP 418
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 704 PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P PPP P P P S P P PP PP S P
Sbjct: 609 PPPPVYSPPPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSPPPPPVKSPP 662
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +2
Query: 704 PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P PPP P P P S P P PP PP P
Sbjct: 529 PPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPP 582
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 725 PPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
PPP P P P S P P PP PP S P
Sbjct: 647 PPPPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPPVHSPPPPPVHSPP 693
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 728 PPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
PP P P P S P P PP PP S P
Sbjct: 751 PPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPP 796
>At1g31817.1 68414.m03907 chloroplast 30S ribosomal protein S11,
putative contains Pfam profile: PF00411: Ribosomal
protein S11
Length = 314
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 181 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVXADRDEASPYAAMLAAQDVAEKCKTLG 360
+ HI N+TFV VTD G +G + + + Y A A+++ + K +G
Sbjct: 195 IIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMG 254
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 704 PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXX-PXPPXXXXXPPXXXXSXP 865
P PPP P P P S P P P PP PP S P
Sbjct: 552 PPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVHSPP 606
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 704 PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P PPP P P P S P P P PP PP P
Sbjct: 527 PPPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPPP--PPPPVHSPPPPVFSPPPP 578
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 704 PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P PPP P P P P P P PP PP S P
Sbjct: 526 PPPPVYSPPPPPPPVHSPPPPVHSPPPPPVYSP---PPPPPPVHSPPPPVFSPP 576
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 725 PPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
PPP P P P S P P P P PP P
Sbjct: 166 PPPPYPSPLPPPPSPSPTPGPDSPLPSPGPDSPLPLPGPPPSPSPTP 212
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPP 844
P P PPP P P P S P P PP PP
Sbjct: 456 PPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPP 505
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 704 PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPP 844
P PPP P P P S P P P P PP
Sbjct: 396 PPVVTPLPPPSLPSPPPPAPIFSTPPTLTSPPPPSPPPPVYSPPPPP 442
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +2
Query: 692 APXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
+P P PPP P P P P P P PP PP S P
Sbjct: 430 SPPPPVYSPPPPPPPPPPVYSPPP----PPPPPPPPPVYSPPPPPPPPPPPPPVYSPP 483
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +2
Query: 704 PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P PPP P P P P P PP PP S P
Sbjct: 468 PPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSP 521
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/61 (27%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Frame = +2
Query: 692 APXF---PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSX 862
AP F P PP P P P P P P PP PP
Sbjct: 414 APIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPP 473
Query: 863 P 865
P
Sbjct: 474 P 474
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPP 844
P P PPP P P P P P PP PP
Sbjct: 514 PPLPTTIAAPPPPPPPPRAAVAPPPPPPPPGTAAAPPPPPPPPGTQAAPP 563
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 688 PXXXLPXXXXXXPPPXXPXXXSXXPXXLXXXXXXXPXXPXXPXXPPXXXXPP 843
P LP PP P P L P P P PP PP
Sbjct: 65 PEPPLPPRFELPPPLFPPPPLPRLPPPLLPPPEEPPREPPPPPPPPEEPPPP 116
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPP 823
P FP PPP P P P P P PP
Sbjct: 36 PLFPQSPPPPPPPPPPPPPPPPPPPPPPPAVNMSVETGIPPPP 78
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Frame = +2
Query: 704 PXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXP-XXXPXPPXXXXXPPXXXXSXP 865
P PPP P P P S P P P PP PP P
Sbjct: 515 PPYVYSSPPPPPPSPPPPCPESSPPPPVVYYAPVTQSPPPPSPVYYPPVTQSPPP 569
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P P PPP P P P S P P PP PP S P
Sbjct: 67 PANPPPPVSSPPPASPPPATPPPVASPPPPVASPPP---ATPPPVATPPPAPLASPP 120
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 695 PXFPXXXXXXPPPXXPXXXXPXPXXSXXPXXXXXXPXXXPXPPXXXXXPPXXXXSXP 865
P P PPP P P P S P P PP PP S P
Sbjct: 67 PANPPPPVSSPPPASPPPATPPPVASPPPPVASPPP---ATPPPVATPPPAPLASPP 120
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,379,626
Number of Sequences: 28952
Number of extensions: 223353
Number of successful extensions: 973
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2071520424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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