Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B07
         (936 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    30   3.0  
08_02_1410 - 26876243-26876497,26877129-26877239,26877240-268773...    29   7.0  
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867...    28   9.3  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   9.3  
01_05_0423 + 22032940-22033695                                         28   9.3  

>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 880 PPXPPXXXGVXXFXPPPPP 936
           PP PP   GV    PPPPP
Sbjct: 92  PPPPPPPYGVNSSQPPPPP 110


>08_02_1410 -
           26876243-26876497,26877129-26877239,26877240-26877324,
           26877620-26877672,26878318-26878440,26878514-26878597,
           26878708-26878773,26879512-26879584,26879854-26879888,
           26879970-26880212
          Length = 375

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 936 GGGGGXKXXNPXXPGGXGG 880
           GGGGG +  NP   GG GG
Sbjct: 18  GGGGGGEGLNPNPSGGGGG 36


>11_04_0307 +
           16185405-16185713,16185847-16185942,16186626-16186730,
           16186938-16187090,16188395-16188478,16188566-16188694,
           16188986-16189165,16189555-16189677,16189678-16189794,
           16189889-16190053
          Length = 486

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 880 PPXPPXXXGVXXFXPPPPP 936
           PP PP   G     PPPPP
Sbjct: 30  PPVPPDPYGADLSPPPPPP 48


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +1

Query: 880 PPXPPXXXGVXXFXPPPPP 936
           PP PP       F PPPPP
Sbjct: 549 PPPPPPSGNKPAFSPPPPP 567


>01_05_0423 + 22032940-22033695
          Length = 251

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 879 PPPPPXXXXGFXFXXPPPP 935
           PPPPP       F  PPPP
Sbjct: 168 PPPPPQGQQQLLFLPPPPP 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,719,451
Number of Sequences: 37544
Number of extensions: 304484
Number of successful extensions: 1445
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)