Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B07
         (936 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094937-1|AAM11290.1|  394|Drosophila melanogaster RH54416p pro...    29   9.2  
AE014298-3099|AAN09667.1|  388|Drosophila melanogaster CG32521-P...    29   9.2  
AE014298-3098|AAF50844.2|  388|Drosophila melanogaster CG32521-P...    29   9.2  

>AY094937-1|AAM11290.1|  394|Drosophila melanogaster RH54416p
           protein.
          Length = 394

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = -1

Query: 936 GGGGGXKXXNPXXPGGXGGXFXXAXKKXXXXXPPGXGXKKKKXXXG 799
           GGGGG    NP   GG  G +           PP  G  + +   G
Sbjct: 150 GGGGGAAPYNPYGSGGGNGGYGGYNPYNGGYQPPSSGGYQPQAPGG 195


>AE014298-3099|AAN09667.1|  388|Drosophila melanogaster CG32521-PB,
           isoform B protein.
          Length = 388

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = -1

Query: 936 GGGGGXKXXNPXXPGGXGGXFXXAXKKXXXXXPPGXGXKKKKXXXG 799
           GGGGG    NP   GG  G +           PP  G  + +   G
Sbjct: 150 GGGGGAAPYNPYGSGGGNGGYGGYNPYNGGYQPPSSGGYQPQAPGG 195


>AE014298-3098|AAF50844.2|  388|Drosophila melanogaster CG32521-PA,
           isoform A protein.
          Length = 388

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 14/46 (30%), Positives = 17/46 (36%)
 Frame = -1

Query: 936 GGGGGXKXXNPXXPGGXGGXFXXAXKKXXXXXPPGXGXKKKKXXXG 799
           GGGGG    NP   GG  G +           PP  G  + +   G
Sbjct: 150 GGGGGAAPYNPYGSGGGNGGYGGYNPYNGGYQPPSSGGYQPQAPGG 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,274,702
Number of Sequences: 53049
Number of extensions: 476387
Number of successful extensions: 2404
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4628299878
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)