Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B07
         (936 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical pr...    31   1.6  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   2.1  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   2.1  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   2.1  

>Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical
           protein ZC168.5 protein.
          Length = 172

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +3

Query: 819 FFXXXXGXGVGXXFFXXXKXPPPPPXXXXGFXFXXPPPP 935
           F     G G+G         PPPPP    G  +  PPPP
Sbjct: 19  FLLEGLGLGLGPQRPQQCCCPPPPPPPPCGGGYEAPPPP 57



 Score = 29.5 bits (63), Expect = 3.6
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 879 PPPPPXXXXGFXFXXPPPP 935
           PPPPP    G+    PPPP
Sbjct: 41  PPPPPPCGGGYEAPPPPPP 59


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 879 PPPPPXXXXGFXFXXPPPP 935
           PPPPP    GF    PPPP
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 879 PPPPPXXXXGFXFXXPPPP 935
           PPPPP    GF    PPPP
Sbjct: 770 PPPPPPPPGGFKGGPPPPP 788


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 879 PPPPPXXXXGFXFXXPPPP 935
           PPPPP    GF    PPPP
Sbjct: 353 PPPPPPPPGGFKGGPPPPP 371


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,269,025
Number of Sequences: 27780
Number of extensions: 223709
Number of successful extensions: 827
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)