BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP02_F_B07 (936 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g43150.1 68415.m05358 proline-rich extensin-like family prote... 30 2.5 At1g61080.1 68414.m06877 proline-rich family protein 29 5.9 At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 28 7.7 >At2g43150.1 68415.m05358 proline-rich extensin-like family protein similar to CRANTZ hydroxyproline-rich glycoprotein [Manihot esculenta] gi|7211797|gb|AAF40442; similar to extensin gi|1165322|gb|AAB53156; contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 212 Score = 29.9 bits (64), Expect = 2.5 Identities = 16/85 (18%), Positives = 26/85 (30%) Frame = +2 Query: 680 PPPXXKXXXKKXFFXGXXXXXXSPXXGXPXXXXXKPXXTXPXXFFFFFXPXPGGXXXXXF 859 PPP K ++ SP P + P +++ P P + Sbjct: 125 PPPPVKSPPPPYYYHSPPPPVKSPPPPYYYHSPPPPVKSPPPPYYYHSPPPPVKSPPPPY 184 Query: 860 FXAXKXXPPXPPGXXGFXFFXPPPP 934 + P P + + PPPP Sbjct: 185 LYSSPPPPVKSPPPPVYIYASPPPP 209 Score = 28.3 bits (60), Expect = 7.7 Identities = 16/85 (18%), Positives = 26/85 (30%) Frame = +2 Query: 680 PPPXXKXXXKKXFFXGXXXXXXSPXXGXPXXXXXKPXXTXPXXFFFFFXPXPGGXXXXXF 859 PPP K ++ SP P + P +++ P P + Sbjct: 61 PPPPVKSPPPPYYYHSPPPPVKSPPPPYVYSSPPPPVKSPPPPYYYHSPPPPVKSPPPPY 120 Query: 860 FXAXKXXPPXPPGXXGFXFFXPPPP 934 + PP + + PPPP Sbjct: 121 YY-HSPPPPVKSPPPPYYYHSPPPP 144 >At1g61080.1 68414.m06877 proline-rich family protein Length = 907 Score = 28.7 bits (61), Expect = 5.9 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +1 Query: 880 PPXPPXXXGVXXFXPPPPP 936 PP PP + F PPPPP Sbjct: 460 PPPPPAVMPLKHFAPPPPP 478 Score = 28.3 bits (60), Expect = 7.7 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = +1 Query: 880 PPXPPXXXGVXXFXPPPPP 936 PP PP G PPPPP Sbjct: 536 PPPPPPPPGTAAAPPPPPP 554 Score = 28.3 bits (60), Expect = 7.7 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = +1 Query: 880 PPXPPXXXGVXXFXPPPPP 936 PP PP G PPPPP Sbjct: 549 PPPPPPPPGTQAAPPPPPP 567 >At3g22800.1 68416.m02874 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycsimilar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 470 Score = 28.3 bits (60), Expect = 7.7 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 Query: 879 PPPPPXXXXGFXFXXPPPP 935 PPPPP + + PPPP Sbjct: 398 PPPPPPPPPPYVYPSPPPP 416 Score = 28.3 bits (60), Expect = 7.7 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 Query: 879 PPPPPXXXXGFXFXXPPPP 935 PPPPP + + PPPP Sbjct: 413 PPPPPPSPPPYVYPPPPPP 431 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,297,574 Number of Sequences: 28952 Number of extensions: 203372 Number of successful extensions: 1117 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 349 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 886 length of database: 12,070,560 effective HSP length: 81 effective length of database: 9,725,448 effective search space used: 2236853040 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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