Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B06
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0190 - 17708513-17708548,17708897-17709295                       30   2.2  
07_01_0583 + 4338003-4338377,4338455-4338647,4338734-4339326           29   3.8  
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886...    29   5.0  
01_06_0969 - 33472588-33474480,33475543-33475623,33475692-334757...    29   6.7  
07_01_0466 - 3518315-3521428                                           28   8.8  
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998...    28   8.8  
05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784           28   8.8  

>06_03_0190 - 17708513-17708548,17708897-17709295
          Length = 144

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 573 QGPPPGR*VEACMS*PCPVTTPPWW 499
           +GPPP R   + +  PC  TT PWW
Sbjct: 15  RGPPPSRTSRSRLR-PCLATTRPWW 38


>07_01_0583 + 4338003-4338377,4338455-4338647,4338734-4339326
          Length = 386

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 483 LDHRPPTREALLPDMANSYRLLLTGLGEDPERAG 584
           ++ RPP   A  P   + +R LL  +  +PERAG
Sbjct: 1   METRPPRAAAPAPARVSRFRRLLVRVSAEPERAG 34


>03_05_1153 +
           30787574-30787608,30787982-30788089,30788651-30788689,
           30789181-30789184,30789496-30789580,30789609-30790321
          Length = 327

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 567 PPPGR*VEACMS*PCPVTTPPWWAVCGPVPGHGG-RCSSRDQA 442
           PPP + VE     P P   P W + C    GHGG  C S  +A
Sbjct: 241 PPPPKVVEVPYPWPYPYPFPSWPSDCCCHHGHGGCHCCSCGKA 283


>01_06_0969 -
           33472588-33474480,33475543-33475623,33475692-33475740,
           33475866-33476281,33477208-33477447
          Length = 892

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 504 REALLPDMANSYRLLLTGLGED 569
           REA LPD+  SY  ++TGL E+
Sbjct: 702 REARLPDLRTSYLTIMTGLTEN 723


>07_01_0466 - 3518315-3521428
          Length = 1037

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 19/64 (29%), Positives = 25/64 (39%)
 Frame = +3

Query: 438 TTPGHENCTFHHDLELDHRPPTREALLPDMANSYRLLLTGLGEDPERAGALEDARTCRQS 617
           T P ++ CT       D  PP   + LPD A         +G+   R   LE  R  R  
Sbjct: 672 TWPVYDPCTVLTVGVFDDPPPPSPSQLPDGAKDAAAFSRPMGKVRIRLSTLESGRVYRGV 731

Query: 618 YALL 629
           Y L+
Sbjct: 732 YPLI 735


>05_05_0030 - 21698625-21698752,21699589-21699627,21699708-21699822,
            21699927-21699992,21701064-21701203,21701424-21701473,
            21701608-21702045,21702757-21702839,21702941-21702977,
            21703366-21703457,21703531-21703615,21703950-21704029,
            21704049-21704105,21704350-21704747,21706322-21707223,
            21707331-21707421,21708123-21710273,21710375-21710813,
            21711180-21711299
          Length = 1836

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
 Frame = +1

Query: 646  QSLEEVLNNAI--FDEDTDEMVVVK-DIEMFS 732
            +   E+L N I  FDEDTDE+ ++K ++E FS
Sbjct: 1577 EECRELLENDIEDFDEDTDEIPIIKLNMEAFS 1608


>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
          Length = 394

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +1

Query: 319 RRARSLVNTKKLQKP*RALTWPMRKVNLKCPERQ*RRGLRPRLVTRTAPSTMTWNWTTDR 498
           R +R+ +  K+ ++P RA + P     +  P       L P   +    S  T  WTT  
Sbjct: 65  RFSRATMTLKRRRRPVRASSSPAPADPMPTPAAS--SALAPATSSPRPASPPTPPWTTAP 122

Query: 499 PPGRRCYRTWLT 534
           PPG      W+T
Sbjct: 123 PPGIAAPPLWIT 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,505,834
Number of Sequences: 37544
Number of extensions: 578898
Number of successful extensions: 1572
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)