Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B06
         (900 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5865| Best HMM Match : No HMM Matches (HMM E-Value=.)              115   5e-26
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)             30   2.2  
SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)                    30   2.9  
SB_54931| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.9  
SB_33187| Best HMM Match : rve (HMM E-Value=1.1)                       30   2.9  
SB_17541| Best HMM Match : DUF638 (HMM E-Value=1.8)                    28   8.9  

>SB_5865| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 324

 Score =  115 bits (277), Expect = 5e-26
 Identities = 49/63 (77%), Positives = 59/63 (93%)
 Frame = +1

Query: 580 QGLLKTPERAAKAMLFFTKGYXQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHHLVPF 759
           QGLLKTPERAAKAML+FTKGY + ++E+LN+A+FDED DE+V+VKDIEMFS+CEHHLVPF
Sbjct: 68  QGLLKTPERAAKAMLYFTKGYEEKVQEILNDAVFDEDHDELVIVKDIEMFSLCEHHLVPF 127

Query: 760 YGK 768
            GK
Sbjct: 128 MGK 130


>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
          Length = 1215

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 725 CFQCANIIWCRFTERSPSGTCHKXXFWVSATGQDRGNILP 844
           C++C    +C     +PSG CH   +     G  RGN  P
Sbjct: 354 CYECPKGSYCLRASAAPSGICHTGHY--CPPGTQRGNQFP 391


>SB_4314| Best HMM Match : 4_1_CTD (HMM E-Value=1.8)
          Length = 922

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 375 NLADAESELEVPGTPMTPRTSTTPGHENCTFHHDLELDH-RPPTREALLP 521
           N A A S +   G+P++PR  T+P    CT +  L     R  +  +LLP
Sbjct: 843 NPASARSSVHA-GSPLSPRPPTSPKPSQCTLNRALSASRVRTASEGSLLP 891


>SB_54931| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 218

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 474 DLELDHRPPTREALLPDMANSYRLLLTGLGEDPERAGALEDARTCRQS-YALLHERIRXK 650
           DLE+ +R  T   L   ++ +Y++L TG+ E  ER    +D  +   + Y  +  + + K
Sbjct: 69  DLEVSYRKGTEMVLADTLSRAYKVLPTGVAE--ERGETEKDTESINMAQYLPVSSQTQAK 126

Query: 651 LGRGSE 668
           + R +E
Sbjct: 127 IQRATE 132


>SB_33187| Best HMM Match : rve (HMM E-Value=1.1)
          Length = 268

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 474 DLELDHRPPTREALLPDMANSYRLLLTGLGEDPERAGALEDARTCRQS-YALLHERIRXK 650
           DLE+ +R  T   L   ++ +Y++L TG+ E  ER    +D  +   + Y  +  + + K
Sbjct: 69  DLEVSYRKGTEMVLADTLSRAYKVLPTGVAE--ERGETEKDTESINMAQYLPVSSQTQAK 126

Query: 651 LGRGSE 668
           + R +E
Sbjct: 127 IQRATE 132


>SB_17541| Best HMM Match : DUF638 (HMM E-Value=1.8)
          Length = 680

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +3

Query: 345 KKAPEALKSFNLADAESELEVPGTPMTPRTSTTPGHENCTFHHDLELDHRPPTREALLPD 524
           K   E  K F    ++ + + PGT      S  PG+   T + D   + R   RE L+PD
Sbjct: 401 KALSEFKKMFRPKFSKPKYDKPGTKADYLISANPGYAPVTSYLDNACNFRTEYREWLVPD 460


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,163,343
Number of Sequences: 59808
Number of extensions: 607589
Number of successful extensions: 2161
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2133
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)