Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B05
(890 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 31 0.95
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 31 1.7
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 31 1.7
SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 30 2.2
SB_45456| Best HMM Match : DUF963 (HMM E-Value=0.00083) 29 5.1
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 6.7
SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 28 8.8
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.8
>SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 31.5 bits (68), Expect = 0.95
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 443 GAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQA 294
G PC+RC + P P R + WR LA ALS +T + A
Sbjct: 95 GQNNPCSRCGLLSCPTTTSP-EKRRKTPSWRTLAPALSPSATQPAACYDA 143
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 31.5 bits (68), Expect = 0.95
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = +3
Query: 462 VEKNATALREKLQAAVQNTVQESQKLAKKV--------SSNVQETNEKLAPKIKAAYDDF 617
VEK A L+EK Q + V + ++ +K S ++ETN L K ++ +
Sbjct: 561 VEKKAKELKEKYQGELNEKVNKVERTLRKQYEEDIVKGRSELEETNRTLKEKYESEVSEI 620
Query: 618 AKNTQEVIKKIQEAANAKQ 674
++V ++ QE A+Q
Sbjct: 621 MLQMEQVQQRNQEVFEAQQ 639
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/65 (24%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 465 EKNATALREKLQAAVQNTVQ-ESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVI 641
E+ AL EK + T+Q E +K +K+ + ++ET E + ++++ + + + T+++
Sbjct: 225 EEKLNALLEKEKIVEMTTLQLEDEK--EKIKNELEETKELMQAELESQAETYTEQTRKMH 282
Query: 642 KKIQE 656
++QE
Sbjct: 283 SELQE 287
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +3
Query: 471 NATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKI 650
+ATA +E+L++AV+ + KL K+S+ ET K A Y+ + ++ +K++
Sbjct: 964 DATASKEELESAVEEKAKAETKLKVKISA--LETKLKKAVNETKRYESSSSQLKQQVKEL 1021
Query: 651 Q 653
+
Sbjct: 1022 E 1022
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 483 LREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKI 650
L+E+ ++ + +Q+ +K K+ S Q+T APK K A TQ KI
Sbjct: 340 LKEEYKSLQRQAMQDLKKQLKQTSEAQQQTETNSAPKAKPAKPSVPSPTQTAPNKI 395
>SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 431 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALL 288
P +RC + P P + R + L WR LA ALS +T + A L
Sbjct: 54 PWSRCGLLSCPTTTSPAKRR-KTLSWRTLAPALSPSATQPDACCDAAL 100
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 465 EKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQ 632
EKN L E +A+QNT+Q + + E A KI+A + K T+
Sbjct: 272 EKNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEADFAAKIEAMEAELQKVTE 327
>SB_45456| Best HMM Match : DUF963 (HMM E-Value=0.00083)
Length = 337
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -1
Query: 443 GAPRPCARCSASTVPKPPWPCR-----SRLRALPWRLLAKALSCCSTDSEPS 303
G P P C +P PP C+ S L A + + +L C +D PS
Sbjct: 123 GIPSPLVACKFDDIPSPPVACKFDDIPSTLVACEFDGIPSSLVTCESDGIPS 174
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -1
Query: 452 GPCGAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 273
G G P P + +P PP C+S +P L+A C D PS L +C S
Sbjct: 180 GSDGIPSPLVAYGSDGIPSPPVACKS--DGIPSTLVA-----CKFDGIPS---SLVACKS 229
Query: 272 FDLVSELNCC 243
+ S L C
Sbjct: 230 DGITSSLAAC 239
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 83 SSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP*DFXNNSLTRS 262
S + S S H + RS R P+ + RRSR Q R+P + + S
Sbjct: 214 SRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRS-PRSSKRYRSS 272
Query: 263 PSQRTHRTSAR 295
S R HR+ +R
Sbjct: 273 RSHRKHRSHSR 283
>SB_26008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 474 ATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQ 653
A +++ QA + T E+QKL + +++ QETNE + K + +KNTQ+ +
Sbjct: 72 AEKIKQLEQALKEKTHNETQKLDRILATCHQETNEVINSK---SISHESKNTQKRSPTLT 128
Query: 654 EAANAKQ 674
+ KQ
Sbjct: 129 MTEHCKQ 135
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/69 (21%), Positives = 29/69 (42%)
Frame = +3
Query: 459 NVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEV 638
N+E + A+ + ++ VQN + E V S + E + + D +
Sbjct: 1055 NMESQSIAIMKTVKGDVQNALDEIMNFTITVDSLIDEIEKNFTVATRGFVSDSLGDLSRS 1114
Query: 639 IKKIQEAAN 665
+K IQ+ A+
Sbjct: 1115 LKAIQDLAD 1123
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +3
Query: 477 TALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQE 656
TA + K ++ Q+ ++ A+KV S QET+ + +DD +++ +I + +
Sbjct: 362 TAKKRKKRSKWIGRRQKVKRRARKVPSGCQETSSSIINGNDEEFDDENMHSETIITE-NQ 420
Query: 657 AANAKQ*ASILNSH 698
N + +SI+N +
Sbjct: 421 TINEETSSSIINGN 434
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,114,253
Number of Sequences: 59808
Number of extensions: 319001
Number of successful extensions: 1117
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2550281014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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