Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B04
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071640-1|AAL49262.1|  195|Drosophila melanogaster RE68515p pro...    79   6e-15
AE014297-3914|AAF56562.1|  195|Drosophila melanogaster CG14543-P...    79   6e-15

>AY071640-1|AAL49262.1|  195|Drosophila melanogaster RE68515p
           protein.
          Length = 195

 Score = 79.4 bits (187), Expect = 6e-15
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
 Frame = +3

Query: 129 FKPXVALVLNNWXALQLAVEHGMGAPGGXXXAQLMAVYIAXYCVENV-VDRXELAEVIEX 305
           F+  V  + N+W  L+LAVEHGMG   G   A  +  Y   YCV N  + + EL EV+E 
Sbjct: 13  FRVIVEKIFNHWQDLRLAVEHGMGGRNGQQVAIEIMDYTYQYCVSNENITQGELVEVLEE 72

Query: 306 LMDEXFDTVCHDESPKEIANXXXXXXXXXKEGXHDELRARIEAMPKCQKWLSXPIHESVP 485
           LMD+ F+T+C D+S  EI           ++    ++ A +  +P  ++WL   +  +  
Sbjct: 73  LMDQEFNTLCDDDSIPEICRNLLRYKLMAQQNQFPQIEAELSKLPAGKEWLRPDVKITYT 132

Query: 486 P 488
           P
Sbjct: 133 P 133


>AE014297-3914|AAF56562.1|  195|Drosophila melanogaster CG14543-PA
           protein.
          Length = 195

 Score = 79.4 bits (187), Expect = 6e-15
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
 Frame = +3

Query: 129 FKPXVALVLNNWXALQLAVEHGMGAPGGXXXAQLMAVYIAXYCVENV-VDRXELAEVIEX 305
           F+  V  + N+W  L+LAVEHGMG   G   A  +  Y   YCV N  + + EL EV+E 
Sbjct: 13  FRVIVEKIFNHWQDLRLAVEHGMGGRNGQQVAIEIMDYTYQYCVSNENITQGELVEVLEE 72

Query: 306 LMDEXFDTVCHDESPKEIANXXXXXXXXXKEGXHDELRARIEAMPKCQKWLSXPIHESVP 485
           LMD+ F+T+C D+S  EI           ++    ++ A +  +P  ++WL   +  +  
Sbjct: 73  LMDQEFNTLCDDDSIPEICRNLLRYKLMAQQNQFPQIEAELSKLPAGKEWLRPDVKITYT 132

Query: 486 P 488
           P
Sbjct: 133 P 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,550,059
Number of Sequences: 53049
Number of extensions: 335570
Number of successful extensions: 752
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)