Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_B03
(986 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.14
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.14
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.14
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 33 0.31
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.31
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.7
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 30 2.2
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 30 2.2
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 3.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 24 6.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 24 7.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 24 7.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.14
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 951 PXKXXXPXGXKPXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPP 805
P P G P PPPP P P PPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.14
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 951 PXKXXXPXGXKPXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPP 805
P P G P PPPP P P PPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.14
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 951 PXKXXXPXGXKPXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPP 805
P P G P PPPP P P PPPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 33.1 bits (72), Expect = 0.31
Identities = 28/125 (22%), Positives = 35/125 (28%)
Frame = -3
Query: 981 PXXXXKXKXXPXKXXXPXGXKPXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPPX 802
P K K P P P P + P P K P P P
Sbjct: 187 PKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPK 246
Query: 801 GKXXXTXXXR*XGRXEXQXKHXKEPXQGENXXDXXXPXGFPHLRPDPXIFXXNLRXPXPX 622
K + + E + K +P N P P L+P P + P P
Sbjct: 247 PKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNP--MPELKPKPKHKPNSRPKPNPR 304
Query: 621 XKPXP 607
KP P
Sbjct: 305 PKPKP 309
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 918 PXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPPXG 799
P PPPP P P PPPPPP G
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 918 PXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPPXG 799
P PPPP P P + PPPPPP G
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPP-RAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 918 PXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPPXG 799
P PPPP P P + PPPPPP G
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPP-RAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 918 PXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPPXG 799
P PPPP P P + PPPPPP G
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPP-RAGSPPPPPPPRG 311
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 24 LSLXGALPFXLSXVVSXPPPPXPPXXPP 107
+++ A P L+ + PPPP PP PP
Sbjct: 776 IAMHSAPPSPLTAPIPPPPPPPPPMLPP 803
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 24 LSLXGALPFXLSXVVSXPPPPXPPXXPP 107
+++ A P L+ + PPPP PP PP
Sbjct: 675 IAMHSAPPSPLTAPIPPPPPPPPPMLPP 702
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 903 PPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPP 805
PPPP Q P PPPPPP
Sbjct: 117 PPPPVQYQNQGPQYIEAPPPPPSPPPPPPPPPP 149
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -3
Query: 918 PXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPP 805
P PPPP P P PPPPPP
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 918 PXXXXPPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPPXG 799
P PPPP Q P P K PPPPP G
Sbjct: 67 PPPPPPPPPLISILQQAP-PPPPPPPPPTLKAPPPPPILG 105
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 806 GGGGGGFXXXFXXXGXFXXXGXAXXXXXXGGGGXXXXG 919
GGGGGG G G GGGG G
Sbjct: 66 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 103
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 797 FPXGGGGGG 823
FP GGGGGG
Sbjct: 20 FPSGGGGGG 28
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.8 bits (49), Expect(2) = 7.1
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = -3
Query: 903 PPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPP 805
PPPP P PPPPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
Score = 23.0 bits (47), Expect(2) = 7.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 822 PPPPPPXG 799
PPPPPP G
Sbjct: 811 PPPPPPGG 818
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.8 bits (49), Expect(2) = 7.1
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = -3
Query: 903 PPPPXXXXXQAXPXXXKXPXXXKXXKXPPPPPP 805
PPPP P PPPPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
Score = 23.0 bits (47), Expect(2) = 7.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 822 PPPPPPXG 799
PPPPPP G
Sbjct: 811 PPPPPPGG 818
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,118,953
Number of Sequences: 27780
Number of extensions: 150970
Number of successful extensions: 2291
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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