Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_B02
         (909 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC080531-1|AAH80531.1|   64|Homo sapiens coiled-coil domain cont...    32   2.5  
AY794023-1|AAV40981.1|   64|Homo sapiens HSPC016 protein protein.      32   2.5  
AY508979-1|AAR87665.1|   64|Homo sapiens unknown protein protein.      32   2.5  

>BC080531-1|AAH80531.1|   64|Homo sapiens coiled-coil domain
           containing 72 protein.
          Length = 64

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +2

Query: 212 KKTPXKHPSRXPRSWTXPX*PTNRS*KXNRRHFSEAKAKATQKGPLTQGWNKEIREK 382
           KK P K P +  +          +  K  ++   E KAKA  KGPL  G  K+  +K
Sbjct: 8   KKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKKSGKK 64


>AY794023-1|AAV40981.1|   64|Homo sapiens HSPC016 protein protein.
          Length = 64

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +2

Query: 212 KKTPXKHPSRXPRSWTXPX*PTNRS*KXNRRHFSEAKAKATQKGPLTQGWNKEIREK 382
           KK P K P +  +          +  K  ++   E KAKA  KGPL  G  K+  +K
Sbjct: 8   KKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKKSGKK 64


>AY508979-1|AAR87665.1|   64|Homo sapiens unknown protein protein.
          Length = 64

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +2

Query: 212 KKTPXKHPSRXPRSWTXPX*PTNRS*KXNRRHFSEAKAKATQKGPLTQGWNKEIREK 382
           KK P K P +  +          +  K  ++   E KAKA  KGPL  G  K+  +K
Sbjct: 8   KKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKKSGKK 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,001,527
Number of Sequences: 237096
Number of extensions: 1189707
Number of successful extensions: 2422
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2398
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)