Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A24
(902 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 182 1e-44
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 4e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 8e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 66 1e-09
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 61 4e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 54 4e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.022
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 41 0.038
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.087
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 37 0.81
UniRef50_A2WEI8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.3
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a ... 33 7.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 182 bits (443), Expect = 1e-44
Identities = 81/81 (100%), Positives = 81/81 (100%)
Frame = +1
Query: 565 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 744
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 745 AVGISVRCRSFAPSWAVCTNP 807
AVGISVRCRSFAPSWAVCTNP
Sbjct: 84 AVGISVRCRSFAPSWAVCTNP 104
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 4e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 657 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 767
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 565 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 678
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +1
Query: 565 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 690
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 329 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 427
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = -3
Query: 807 GVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQG 640
GVRA+SPAWSERP P+ DT SVSYEKAPRFPKG++ + +G Q R + +G
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -1
Query: 710 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 591
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/57 (64%), Positives = 38/57 (66%)
Frame = -2
Query: 562 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIXLILWITVLPPLSELIPLAAAERP 392
RGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 305 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 463
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 54.4 bits (125), Expect = 4e-06
Identities = 32/72 (44%), Positives = 34/72 (47%)
Frame = +1
Query: 592 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 771
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 772 SFAPSWAVCTNP 807
SFAPSWAV NP
Sbjct: 83 SFAPSWAVSKNP 94
Score = 38.3 bits (85), Expect = 0.27
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 620 IKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGAFS*LTL*VSQFGVGRSLQA---- 787
+KI VS LP ALSCS+PA RIPV PF G+ + S G+ ++
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVA--LSHSSHSGISARCRSFAPS 87
Query: 788 -GLCARTPVQPDRXALSGTIVLSPXRXTRLIATGS 889
+ P P T+ LSP R + ATGS
Sbjct: 88 WAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATGS 122
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 107 DPDMIRYIDEFGQTTTRMQ 163
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 529 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 678
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.022
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 231 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 353
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 41.1 bits (92), Expect = 0.038
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -3
Query: 807 GVRAHSPAWSERPTPN 760
GVRAHSPAWSERPTPN
Sbjct: 27 GVRAHSPAWSERPTPN 42
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.087
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 375 ERGSGRAPNTQTASPRALADSLMQ 304
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 36.7 bits (81), Expect = 0.81
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3
Query: 807 GVRAHSPAWSERPTPN*DT 751
GV A+SPAWSERPTP+ DT
Sbjct: 27 GVLAYSPAWSERPTPSRDT 45
>UniRef50_A2WEI8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia dolosa AUO158|Rep: Putative uncharacterized
protein - Burkholderia dolosa AUO158
Length = 390
Score = 35.1 bits (77), Expect = 2.5
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = -1
Query: 848 RR*YRIRXXGRAER---GFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQ 678
RR +R+R GR +R G V + +D R + A R RH R ++ Q+ G+R+
Sbjct: 180 RRHFRVRRNGRRDRRQRGAVDARRRHPSDARRAQRAGAGQRRARHGRRHDRRRQLPGRRR 239
Query: 677 GRNRRA 660
+RA
Sbjct: 240 AEPQRA 245
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.3
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 737 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 633
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 265 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 101
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a
DNA-binding HTH domain and an aminotransferase domain
(MocR family) and their eukaryotic orthologs; n=1;
Hahella chejuensis KCTC 2396|Rep: Transcriptional
regulator containing a DNA-binding HTH domain and an
aminotransferase domain (MocR family) and their
eukaryotic orthologs - Hahella chejuensis (strain KCTC
2396)
Length = 498
Score = 33.5 bits (73), Expect = 7.5
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 737 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQG 558
MRKR+A R++ R+G EG + G LV S PL+ S F+ VQ
Sbjct: 395 MRKRYAMRQQTLATALQPREGDVEILVEGDNAGLHLV---CWMPSLPLSAVSTFIEQVQT 451
Query: 557 GGAYGKTPATRPFY-GSWPFAGLLL 486
G + PFY G P AGLLL
Sbjct: 452 QGV--RVYPIHPFYHGEPPAAGLLL 474
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,617,493
Number of Sequences: 1657284
Number of extensions: 17423758
Number of successful extensions: 48097
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 45414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48057
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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