Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_A22
         (980 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   2.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   7.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   7.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   7.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   9.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   9.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   9.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   9.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 315 PTSGAHMNPAVTLAAALQGRMSP 383
           P SG H + A  LAA L G + P
Sbjct: 515 PPSGHHASSAPLLAATLAGGLCP 537


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 761 PAPSRXHXPPXSPXXGLXPAPPXXPRP 841
           P PS  H  P +P  G  P P   P P
Sbjct: 23  PQPS-PHQSPQAPQRGSPPNPSQGPPP 48


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 364 SAAASVTAGFMCAPDVGPNAIALPS 290
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 364 SAAASVTAGFMCAPDVGPNAIALPS 290
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 364 SAAASVTAGFMCAPDVGPNAIALPS 290
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 268 AGCDSTTASFPLYGTTELTPSHTRNAVASRSETS 167
           A   ST+ S+P  G++  +PS   +  +S S TS
Sbjct: 74  AAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPTS 107


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 180 DRRPALATIAAPSRTNRAAYLRLWRAC 100
           + RPA+A ++  S  N+   LR  ++C
Sbjct: 470 NERPAVAVVSKSSSINKLEDLRNKKSC 496


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 180 DRRPALATIAAPSRTNRAAYLRLWRAC 100
           + RPA+A ++  S  N+   LR  ++C
Sbjct: 470 NERPAVAVVSKSSSINKLEDLRNKKSC 496


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 180 DRRPALATIAAPSRTNRAAYLRLWRAC 100
           + RPA+A ++  S  N+   LR  ++C
Sbjct: 470 NERPAVAVVSKSSSINKLEDLRNKKSC 496


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,175
Number of Sequences: 438
Number of extensions: 4847
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32411652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)