Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_A18
(897 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 41 0.002
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 34 0.14
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 33 0.24
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.31
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 33 0.41
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 33 0.41
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.41
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.72
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 1.3
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 28 2.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 3.9
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 28 8.9
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 28 8.9
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 8.9
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 28 8.9
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 8.9
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/103 (28%), Positives = 31/103 (30%), Gaps = 4/103 (3%)
Frame = +1
Query: 541 PPX*GXXGPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXX----FXXPPXXXAKPXXPP 708
PP G PPP + PPPP + G P PP A P PP
Sbjct: 308 PPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPP 367
Query: 709 PLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXP 837
P P P G PPPP GP P
Sbjct: 368 PPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPGPMIP 410
Score = 32.3 bits (70), Expect = 0.55
Identities = 27/103 (26%), Positives = 27/103 (26%)
Frame = +1
Query: 541 PPX*GXXGPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXX 720
PP G PPP PPPP G G PP PPP
Sbjct: 290 PPSRGAAPPPPSR---GAPPPPPSRGSAPPPPPARMGTAPP---PPPPSRSSQRPPPPSR 343
Query: 721 FFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
P G PPPP PP PP
Sbjct: 344 GAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPP 386
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 34.7 bits (76), Expect = 0.10
Identities = 26/102 (25%), Positives = 27/102 (26%)
Frame = +1
Query: 541 PPX*GXXGPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXX 720
PP PPP PPPP P PP P PPP
Sbjct: 118 PPPNAPYPPPPNP----PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAP 173
Query: 721 FFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSP 846
+ P P P PPP PP P P
Sbjct: 174 YPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPP 215
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/108 (25%), Positives = 29/108 (26%), Gaps = 3/108 (2%)
Frame = +1
Query: 535 GXPPX*GXXGPP-PETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXP-P 708
G PP PP P PPPP P P P P P
Sbjct: 82 GHPPTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYP 141
Query: 709 PLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXX-FXGPPXPXSPP 849
P P P P PPPP + PP P PP
Sbjct: 142 PSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPP 189
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 84 PPTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYP 117
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/103 (28%), Positives = 30/103 (29%)
Frame = -2
Query: 848 GGXXGXGGPXKXXXXXXXGGGGXFXXGXKXXPPXPXGXGKXKXXXXGGGXXGFAXXXGGX 669
GG G GG GGGG G G G GGG G GG
Sbjct: 770 GGGGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGG 829
Query: 668 XKXXGXPXFXXXXXFFXPXXGGGGXXXXRXVSGGGPXXPX*GG 540
G F + GGGG GGG GG
Sbjct: 830 YGDGG--GFGDGGGYADGDGGGGGGGGGGGGGGGGGGGGGGGG 870
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 33.5 bits (73), Expect = 0.24
Identities = 27/97 (27%), Positives = 27/97 (27%), Gaps = 1/97 (1%)
Frame = +1
Query: 562 GPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXXPXP 741
GPP P G K P F PP A PP L P
Sbjct: 43 GPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIGPPGLPGPNGVNGP 102
Query: 742 XGXGGXXFXPXKXXPP-PPXXXXXXXFXGPPXPXSPP 849
G G P PP P GPP P PP
Sbjct: 103 PGELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPP 139
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 33.5 bits (73), Expect = 0.24
Identities = 25/85 (29%), Positives = 25/85 (29%)
Frame = +1
Query: 541 PPX*GXXGPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXX 720
PP PPP PPPP G G PP A PPP
Sbjct: 914 PPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSA----PPPGGG 969
Query: 721 FFXXPXPXGXGGXXFXPXKXXPPPP 795
P P G P PPPP
Sbjct: 970 APPLPPPPGGSAPPPPPPPPPPPPP 994
Score = 31.9 bits (69), Expect = 0.72
Identities = 24/86 (27%), Positives = 25/86 (29%)
Frame = +1
Query: 598 PPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXK 777
PPPP G G PP P PPP P P G P
Sbjct: 921 PPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGG--SAPPPGGGAPPLPPPPG 978
Query: 778 XXPPPPXXXXXXXFXGPPXPXSPPQK 855
PPP PP P PP +
Sbjct: 979 GSAPPPPP--------PPPPPPPPMR 996
Score = 31.9 bits (69), Expect = 0.72
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = +1
Query: 598 PPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXK 777
PPPP G G PP A P PPP P G G
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPP----GGSAPPPGGGAPPL---- 973
Query: 778 XXPPPPXXXXXXXFXGPPXPXSPPQK 855
PPPP PP P P +K
Sbjct: 974 --PPPPGGSAPPPPPPPPPPPPPMRK 997
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 673 PPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
PP P PPP P P G P PP PP +PP
Sbjct: 914 PPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPP 972
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 33.1 bits (72), Expect = 0.31
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Frame = +1
Query: 562 GPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXXPXP 741
GPPP PPP G P PP A P PPP+ P P
Sbjct: 2139 GPPPMGSSRYGPPPPMGPARHSPSGPSPLGAPPSV--PPPMGAPPSGPPPMGAPPSGPPP 2196
Query: 742 XGXGGXXFXPXKXXP--PPP 795
G P P PPP
Sbjct: 2197 MGTPPSGHPPMGAPPMGPPP 2216
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 673 PPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
PP P PPP P P P PPPP PP P PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +1
Query: 676 PXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
P P PPP P P P PPPP PP P PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP+ P P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPP 399
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP + P PP PP PPP P P
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPP 398
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPP 405
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 767 PPXKXXPXPPGXXXXXXXXGPPXXXPPPKXPXXP 868
PP P PP PP PPP P P
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 32.7 bits (71), Expect = 0.41
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 15/120 (12%)
Frame = +1
Query: 535 GXPPX*GXXGPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXX------PPXXXAKP 696
G PP PPP+ PPPP + G P PP A P
Sbjct: 261 GEPPPPKNAPPPPKR--GSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATP 318
Query: 697 XXPPPLXXFFXXPXPXGXGGXXFXP---------XKXXPPPPXXXXXXXFXGPPXPXSPP 849
PPP P P G P + PPPP GPP P PP
Sbjct: 319 PPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPP--PP 376
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/99 (27%), Positives = 31/99 (31%)
Frame = +1
Query: 553 GXXGPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXX 732
G PPPE PPP ++ G PP +P PPP+
Sbjct: 203 GSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRP--PPPMR----- 255
Query: 733 PXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
P G P K PPPP PP PP
Sbjct: 256 -GPTSGGEP--PPPKNAPPPPKRGSSN--PPPPPTRGPP 289
Score = 29.5 bits (63), Expect = 3.9
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Frame = +1
Query: 565 PPPETILXXXXPPPPXXGXKKXXXWXXXGXPXX-FXXPPXXXAKPXXPPPLXXFFXXPXP 741
PPP PPPP G PP ++P PP P
Sbjct: 195 PPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPM 254
Query: 742 XGX-GGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPPQKXXXXXXXXXGGP 891
G G P K PPPP G P PP + GP
Sbjct: 255 RGPTSGGEPPPPKNAPPPPKR-------GSSNPPPPPTRGPPSNSFTTQGP 298
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 32.7 bits (71), Expect = 0.41
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 15/120 (12%)
Frame = +1
Query: 535 GXPPX*GXXGPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXX------PPXXXAKP 696
G PP PPP+ PPPP + G P PP A P
Sbjct: 173 GEPPPPKNAPPPPKR--GSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATP 230
Query: 697 XXPPPLXXFFXXPXPXGXGGXXFXP---------XKXXPPPPXXXXXXXFXGPPXPXSPP 849
PPP P P G P + PPPP GPP P PP
Sbjct: 231 PPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPP--PP 288
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/99 (27%), Positives = 31/99 (31%)
Frame = +1
Query: 553 GXXGPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXX 732
G PPPE PPP ++ G PP +P PPP+
Sbjct: 115 GSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRP--PPPMR----- 167
Query: 733 PXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
P G P K PPPP PP PP
Sbjct: 168 -GPTSGGEP--PPPKNAPPPPKRGSSN--PPPPPTRGPP 201
Score = 29.5 bits (63), Expect = 3.9
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Frame = +1
Query: 565 PPPETILXXXXPPPPXXGXKKXXXWXXXGXPXX-FXXPPXXXAKPXXPPPLXXFFXXPXP 741
PPP PPPP G PP ++P PP P
Sbjct: 107 PPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPM 166
Query: 742 XGX-GGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPPQKXXXXXXXXXGGP 891
G G P K PPPP G P PP + GP
Sbjct: 167 RGPTSGGEPPPPKNAPPPPKR-------GSSNPPPPPTRGPPSNSFTTQGP 210
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 32.7 bits (71), Expect = 0.41
Identities = 24/84 (28%), Positives = 28/84 (33%)
Frame = +1
Query: 598 PPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXK 777
PPP G + G P P P PPP P P G + P +
Sbjct: 429 PPPQHTGPPQPRP--PHGMPQGGGPPQLPPNLP--PPPGGMRGMPPPPMGM----YPPPR 480
Query: 778 XXPPPPXXXXXXXFXGPPXPXSPP 849
PPPP + GPP P P
Sbjct: 481 GFPPPPFGPPPPFYRGPPPPRGMP 504
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 31.9 bits (69), Expect = 0.72
Identities = 32/105 (30%), Positives = 36/105 (34%), Gaps = 6/105 (5%)
Frame = +1
Query: 541 PPX*GXXG-PPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPP-- 711
PP G G PPP PPPP G + G PP + PPP
Sbjct: 494 PPGAGQGGGPPPPGAGQGGGPPPPGAG--QGWGQPPPGAGQGGGPPPPGAGQGGGPPPPG 551
Query: 712 LXXFFXXPXP-XGXGGXXFXP--XKXXPPPPXXXXXXXFXGPPXP 837
+ P P G GG P + PPPP GPP P
Sbjct: 552 AGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQ----EGPPPP 592
Score = 28.7 bits (61), Expect = 6.7
Identities = 31/107 (28%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Frame = +1
Query: 535 GXPPX*GXX---GPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXP 705
G PP G GPPP PPP G G PP P
Sbjct: 501 GGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGG-PPPPGAGQGWGQP 559
Query: 706 PPLXXFFXXPXPXGXGGXXFXP---XKXXPPPPXXXXXXXFXGPPXP 837
PP P P G G P + PPPP GPP P
Sbjct: 560 PPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQG---GGPPPP 603
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 541 PPX*GXXGPPPETILXXXXPPPPXXG 618
PP G GPPP PPPP G
Sbjct: 581 PPGAGQEGPPPPGAGQGGGPPPPGAG 606
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 562 GPPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXXPXP 741
GPPP PPPP G + G P P A P PPP+ P P
Sbjct: 659 GPPP--------PPPPPPGGQAG------GAPPPPPPPLPGGAAPPPPPPIGGGAPPPPP 704
Query: 742 XGXGG 756
G GG
Sbjct: 705 PGFGG 709
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 27.9 bits (59), Expect(2) = 2.5
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 703 PPPLXXFFXXPXPXGXGGXXFXPXKXXPPPP 795
PPP F P P GG P K PPPP
Sbjct: 655 PPPGGGMFPPPPPPPPGGGVPGPPK--PPPP 683
Score = 20.6 bits (41), Expect(2) = 2.5
Identities = 7/17 (41%), Positives = 7/17 (41%)
Frame = +1
Query: 568 PPETILXXXXPPPPXXG 618
PP PPPP G
Sbjct: 644 PPNPFFGGIPPPPPGGG 660
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +1
Query: 598 PPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXK 777
PPPP P PP KP PPP P P G P
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPP----PPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPT 401
Query: 778 XXPPPP 795
PPPP
Sbjct: 402 NGPPPP 407
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 673 PPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
PP P PPP P P P PPPP PP PP
Sbjct: 348 PPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPP 406
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 673 PPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
PP P PPP P P P PPPP PP PP
Sbjct: 347 PPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 405
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 673 PPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPPQ 852
PP P PPP P P G P PPPP PP PP
Sbjct: 358 PPPTNNTPPPPPPTNKP-PPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPS 416
Query: 853 K 855
+
Sbjct: 417 E 417
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +1
Query: 673 PPXXXAKPXXPPPLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSP 846
PP A P PP F P P G P PPP GPP P P
Sbjct: 1235 PPPPPAMPPDGPP--KFMGLPPPP-PGMRPMPPQPPFMPPPPRMQPPGPPGPPGPPGP 1289
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/94 (26%), Positives = 27/94 (28%)
Frame = +1
Query: 565 PPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLXXFFXXPXPX 744
PPP+TI PPP W P + P PP P
Sbjct: 329 PPPKTIPSTLPPPPVPSATSAPPPWATSNS-----GPKPLMSTPVQRPP------GMRPP 377
Query: 745 GXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSP 846
G G PPPP GPP P P
Sbjct: 378 GAGNGP-----GGPPPPWSKPGGILPGPPPPGPP 406
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 768 PPXKXXPXPXGXXGXXLXGAPPPXXPPPKXPXXP 869
PP P P G G GAPPP PP P P
Sbjct: 195 PPPPPPPPPPGFPG----GAPPPPPPPFGAPPPP 224
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = +3
Query: 759 GFXPPXKXXPX---PXGXXGXXLXGAPPPXXPPPKXP 860
G PP P P G G + G PPP PPP P
Sbjct: 251 GMPPPGMMPPPGFPPMGMPG--MGGMPPPGMPPPMPP 285
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +1
Query: 541 PPX*GXXG-PPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAKPXXPPPLX 717
PP G G PPP I PPP G P P P P P
Sbjct: 60 PPQPGYAGGPPPPGIAPGIGGPPPSGQYGAPPTSQPYGAPPTSGY-PGYQQHPPPPQPSA 118
Query: 718 XFFXXPXPXGXG 753
+ P P G G
Sbjct: 119 QSYNAPPPAGYG 130
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 694 PXXPPPLXXFFXXPXPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPPQK 855
P PPP P P G P PPPP PP P P K
Sbjct: 715 PPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPP---GCAGLPPPPPPIDVPMK 765
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 541 PPX*GXXGPPPETILXXXXPPPPXXG 618
PP G PPP I PPPP G
Sbjct: 199 PPGPGGIPPPPPPIRGGVPPPPPMGG 224
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.3 bits (60), Expect = 8.9
Identities = 29/98 (29%), Positives = 30/98 (30%), Gaps = 3/98 (3%)
Frame = +1
Query: 565 PPPETILXXXXPPPPXXGXKKXXXWXXXGXPXXFXXPPXXXAK--PXXPPPLXXFFXXPX 738
PPP T PPPP G P PP A P PPP+ P
Sbjct: 127 PPPPTSPATRAPPPPPP------IAPATGGPPP--PPPIAPATGGPPPPPPIAPAATVPA 178
Query: 739 PX-GXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXSPP 849
P P PPPP PP P PP
Sbjct: 179 PAVPLAAASPPPPSGGPPPPPPP-------PPPPPPPP 209
Score = 28.3 bits (60), Expect = 8.9
Identities = 25/96 (26%), Positives = 26/96 (27%), Gaps = 3/96 (3%)
Frame = +1
Query: 565 PPPETILXXXXPPPPXXGXKKXXXWXXXGX-PXXFXXPPXXXAKPXX--PPPLXXFFXXP 735
PPP + PPPP P PP P P P
Sbjct: 128 PPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAAS 187
Query: 736 XPXGXGGXXFXPXKXXPPPPXXXXXXXFXGPPXPXS 843
P GG P PPPP PP P S
Sbjct: 188 PPPPSGGPPPPPPPPPPPPP--PPILELAAPPPPGS 221
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,742,333
Number of Sequences: 59808
Number of extensions: 370563
Number of successful extensions: 1759
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2574115416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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