Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_A18
         (897 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   124   5e-30
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.2  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  124 bits (298), Expect = 5e-30
 Identities = 68/111 (61%), Positives = 75/111 (67%)
 Frame = +1

Query: 139 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQXR 318
           IEKYYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQ  
Sbjct: 17  IEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEE 76

Query: 319 GA*EA*XLCPRSVCSRXMTSSK*TPNTXDMLXMLDFTNINGLQLTQXATXG 471
                    P  V +      +  P T +ML  LDF NI  +QLT     G
Sbjct: 77  ERERRDNYVP-DVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNPTAPG 125


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 816 LXGAPPPXXPPPKXPXXP 869
           L  A PP  PPP  P  P
Sbjct: 576 LPNAQPPPAPPPPPPMGP 593


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 822 GAPPPXXPPPKXPXXP 869
           G+PPP  PPP     P
Sbjct: 781 GSPPPPPPPPPSSLSP 796


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,862
Number of Sequences: 2352
Number of extensions: 12479
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)